RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 POFUT1Q9H488 388 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 GPN1Q9HCN4 374 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 SDHAF2Q9NX18 166 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF835Q9Y2P0 537 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 U3KQE9 123 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 CEACAM18A8MTB9 384 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 G3V3Y1 287 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 RAB27BO00194 218 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 SIX6O95475 246 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 PPP3CBP16298 524 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 ACHEP22303 614 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 UBE2MP61081 183 aaKnown RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF345Q14585 488 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 HIST3H3Q16695 136 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 DEGS2Q6QHC5 323 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 Q6ZSR3 168 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 OR6M1Q8NGM8 313 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 OR5M9Q8NGP3 310 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 OR5M8Q8NGP6 311 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 CCDC120Q96HB5 630 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 JSRP1Q96MG2 331 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 NAA11Q9BSU3 229 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 C1QTNF6Q9BXI9 259 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 PNRC2Q9NPJ4 139 aaKnown RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 SPRR3Q9UBC9 169 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 VSIG4Q9Y279 399 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 BSNQ9UPA5 3926 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 SSX5O60225 188 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 SLC16A7O60669 478 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 CYTIPO60759 359 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 SLC25A4P12235 298 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 NAT1P18440 290 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 ZBTB25P24278 435 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 HTR2CP28335 458 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 ARL5BQ96KC2 179 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 FOXN4Q96NZ1 517 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 CHIAQ9BZP6 476 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 OR11A1Q9GZK7 315 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 GLRX2Q9NS18 164 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF230Q9UIE0 474 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 GDF2Q9UK05 429 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 IKZF2Q9UKS7 526 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 CNOT1A5YKK6 2376 aaKnown RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 A0A0A6YYD4 124 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 A0A0J9YW62 118 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 RNF222A6NCQ9 220 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF724A8MTY0 619 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 F5H5P2 479 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 F10P00742 488 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 TTRP02766 147 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 OR4E1P0C645 316 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 PMPCAQ10713 525 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 GUSBP1Q15486 140 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 HSD17B13Q7Z5P4 300 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 YRDCQ86U90 279 aaKnown RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 SLC51BQ86UW2 128 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 MRPL41Q8IXM3 137 aaKnown RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 SPERTQ8NA61 448 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 SARAFQ96BY9 339 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 CYYR1Q96J86 154 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 OXGR1Q96P68 337 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 TINAGL1Q9GZM7 467 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 CALHM2Q9HA72 323 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 CYB5R1Q9UHQ9 305 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 TRAV18A0A075B6X5 111 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 LOC107986453A0A1B0GWG9 222 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 AHRRA9YTQ3 701 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 C11orf98E9PRG8 122 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 I3L521 148 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 GOSR2O14653 212 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 PLGP00747 810 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 CCL1P22362 96 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 PRSS3P35030 304 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 TAS2R19P59542 299 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 FMODQ06828 376 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 EIF2B1Q14232 305 aaKnown RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 RNF144BQ7Z419 303 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 DVL3Q92997 716 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 SLC6A7Q99884 636 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 SLCO5A1Q9H2Y9 848 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 BCO1Q9HAY6 547 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 CLCF1Q9UBD9 225 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 TNFSF18Q9UNG2 199 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 COA3Q9Y2R0 106 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-202ENST00000379996 LIPGQ9Y5X9 500 aa6.75□□□□□ -1.33
CDKL5-202ENST00000379996 AHCTF1Q8WYP5 2266 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 ASPMQ8IZT6 3477 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 FAM166BA8MTA8 275 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM14DPA8MWL7 114 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 FCGR2AP12318 317 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 FAUP35544 74 aaKnown RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 DAP3P51398 398 aaKnown RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 ACTBP60709 375 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 ACTG1P63261 375 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 ADAM8P78325 824 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 RNPS1Q15287 305 aaKnown RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 ODF4Q2M2E3 257 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 GLYATL3Q5SZD4 288 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 FAM180AQ6UWF9 173 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 SLC25A42Q86VD7 318 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms