RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TRAV17A0A0B4J275 112 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 KDM4BO94953 1096 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 GABRA1P14867 456 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 NUP62P37198 522 aaPredicted RBP16.99■□□□□ 0.31
SSU72-204ENST00000378726 SLC6A9P48067 706 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 SCAND1P57086 179 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 BTN1A1Q13410 526 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 RAB11BQ15907 218 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 C2orf76Q3KRA6 126 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 OR51S1Q8NGJ8 323 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 SCARB1Q8WTV0 552 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 PGAM5Q96HS1 289 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 RNF122Q9H9V4 155 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 BCO1Q9HAY6 547 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 ZC4H2Q9NQZ6 224 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 SLC7A10Q9NS82 523 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 MED9Q9NWA0 146 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 CFAP47Q6ZTR5 3102 aa16.99■□□□□ 0.31
SSU72-204ENST00000378726 TRAV18A0A075B6X5 111 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 ZNF724A8MTY0 619 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 F5H5P2 479 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 SGCEO43556 437 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 CEACAM4O75871 244 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 TPPPO94811 219 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 CSF1P09603 554 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 PATE4P0C8F1 98 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 CD37P11049 281 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 GTF2F2P13984 249 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 GFOD2Q3B7J2 385 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 GLYATL3Q5SZD4 288 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 FAM166AQ6J272 317 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 OR5D14Q8NGL3 314 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 DVL3Q92997 716 aaPredicted RBP16.98■□□□□ 0.31
SSU72-204ENST00000378726 SPTSSAQ969W0 71 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 FAM3DQ96BQ1 224 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 CGGBP1Q9UFW8 167 aaPredicted RBP16.98■□□□□ 0.31
SSU72-204ENST00000378726 RTTNQ86VV8 2226 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 TMEM272A0A1B0GTI8 110 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 E9PLN8 166 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 KLK10O43240 276 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 SNAPC5O75971 98 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 DBHP09172 617 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 PPP3CBP16298 524 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 POU3F4P49335 361 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 RNPS1Q15287 305 aaKnown RBP16.98■□□□□ 0.31
SSU72-204ENST00000378726 MCEMP1Q8IX19 187 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 OR8S1Q8NH09 359 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 FAM71F1Q96KD3 344 aaPredicted RBP16.98■□□□□ 0.31
SSU72-204ENST00000378726 LINC00470Q9BZP3 86 aa16.98■□□□□ 0.31
SSU72-204ENST00000378726 MS4A7Q9GZW8 240 aaPredicted RBP16.98■□□□□ 0.31
SSU72-204ENST00000378726 ZNF32P17041 273 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 HTR2CP28335 458 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 OTX1P32242 354 aaPredicted RBP16.97■□□□□ 0.31
SSU72-204ENST00000378726 SCRN3Q0VDG4 424 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 ZNF774Q6NX45 483 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 GSG1LQ6UXU4 331 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 ZNF813Q6ZN06 617 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 SLC16A14Q7RTX9 510 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 SKA3Q8IX90 412 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 SLC25A28Q96A46 364 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 SHARPINQ9H0F6 387 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 TAS2R8Q9NYW2 309 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 C5orf63A6NC05 138 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 A8MXK9 166 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 M0R135 149 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 APOC1P02654 83 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 CD3DP04234 171 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 ABOP16442 354 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 CALCRP30988 508 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 JAGN1Q8N5M9 183 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 ZNF799Q96GE5 643 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 TMEM138Q9NPI0 162 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 TIMM10BQ9Y5J6 103 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 SESN1Q9Y6P5 492 aa16.97■□□□□ 0.31
SSU72-204ENST00000378726 AKAIN1P0CW23 69 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 ZNF20P17024 532 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 BDKRB2P30411 391 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 GK2Q14410 553 aaPredicted RBP16.96■□□□□ 0.31
SSU72-204ENST00000378726 RAB35Q15286 201 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 DOK3Q7L591 496 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 OVCH2Q7RTZ1 564 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 OR1M1Q8NGA1 313 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 FGFBP3Q8TAT2 258 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 TNFAIP8L1Q8WVP5 186 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 SLC17A5Q9NRA2 495 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 PFDN2Q9UHV9 154 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 KLK13Q9UKR3 277 aa16.96■□□□□ 0.31
SSU72-204ENST00000378726 LOC100289279A0A1B0GTE1 492 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 TOR1AO14656 332 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 SYNGR3O43761 229 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 CCL1P22362 96 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 PSG4Q00888 419 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 ZNF660Q6AZW8 331 aaPredicted RBP16.96■□□□□ 0.3
SSU72-204ENST00000378726 STPG2Q8N412 459 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 NKAIN3Q8N8D7 197 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 OR1F12Q8NHA8 337 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 AKR7LQ8NHP1 331 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 ST8SIA4Q92187 359 aa16.96■□□□□ 0.3
SSU72-204ENST00000378726 FOXRED1Q96CU9 486 aaPredicted RBP16.96■□□□□ 0.3
SSU72-204ENST00000378726 AKAP13Q12802 2813 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms