RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PLPP2O43688 288 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 TNFSF13O75888 250 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 PNLIPP16233 465 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 FAM3BP58499 235 aaPredicted RBP10.59□□□□□ -0.71
NPHP4-202ENST00000378161 KCNMB1Q16558 191 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 TEX38Q6PEX7 206 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 ARIH2OSQ8N7S6 290 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 ST6GALNAC3Q8NDV1 305 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 PDCD1LG2Q9BQ51 273 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 SERTAD3Q9UJW9 196 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 HDGFL3Q9Y3E1 203 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 ADAMTSL1Q8N6G6 1762 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 KIAA1217Q5T5P2 1943 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.59□□□□□ -0.71
NPHP4-202ENST00000378161 NPIPA5A0A0B4J1W7 369 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 A0A1B0GW15 77 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 DIRC3C9JPN6 131 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 EIF4E2O60573 245 aaKnown RBP10.59□□□□□ -0.71
NPHP4-202ENST00000378161 CDS2O95674 445 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 PIGPP57054 158 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 HYAL1Q12794 435 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 ELAVL3Q14576 367 aaKnown RBP10.59□□□□□ -0.71
NPHP4-202ENST00000378161 KIAA0040Q15053 153 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 PHYHD1Q5SRE7 291 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 UEVLDQ8IX04 471 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 RNASEH2CQ8TDP1 164 aaKnown RBP10.59□□□□□ -0.71
NPHP4-202ENST00000378161 ARSGQ96EG1 525 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 WASHC3Q9Y3C0 194 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 MYO7AQ13402 2215 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 SHISA3A0PJX4 238 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 C22orf46C9J442 243 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 RENP00797 406 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 IGLV3-27P01718 113 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 DPP4P27487 766 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 CSNK2A1P68400 391 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-202ENST00000378161 HTD2P86397 168 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 TMEM241Q24JQ0 296 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 BHLHA9Q7RTU4 235 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 TMEM229BQ8NBD8 167 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 CSNK2A3Q8NEV1 391 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 HINT3Q9NQE9 182 aaKnown RBP10.58□□□□□ -0.72
NPHP4-202ENST00000378161 TRIP11Q15643 1979 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 A0A087WWC5 75 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 A0A1W2PRS3 328 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 VAMP5O95183 116 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 ST6GAL1P15907 406 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 GZMMP51124 257 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 IL24Q13007 206 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 CRMP1Q14194 572 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 SLC35E3Q7Z769 313 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 RTN4RL1Q86UN2 441 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-202ENST00000378161 OR2T10Q8NGZ9 312 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 RBMXL1Q96E39 390 aaKnown RBP10.58□□□□□ -0.72
NPHP4-202ENST00000378161 SLC25A44Q96H78 314 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-202ENST00000378161 C1orf123Q9NWV4 160 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 FEZF1A0PJY2 475 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 SCGB2A1O75556 95 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 TDGF1P13385 188 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 CEACAM1P13688 526 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 CD1BP29016 333 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF136P52737 540 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 ELOBQ15370 118 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 SLC25A26Q70HW3 274 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 SLC36A1Q7Z2H8 476 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 ZFP62Q8NB50 900 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-202ENST00000378161 HSPB9Q9BQS6 159 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 NMES1Q9C002 83 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 SRD5A3Q9H8P0 318 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 SLC2A8Q9NY64 477 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 CLEC4EQ9ULY5 219 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF860A6NHJ4 632 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 H0YL77 283 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 TRAPPC2LH3BP13 241 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 IGFBP4P22692 258 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 RAB32Q13637 225 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 TMEM184AQ6ZMB5 413 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 TRAPPC6BQ86SZ2 158 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 KLHDC3Q9BQ90 382 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 C1QTNF2Q9BXJ5 285 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 DUSP15Q9H1R2 295 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-202ENST00000378161 ABI3Q9P2A4 366 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 CLN8Q9UBY8 286 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 LIPGQ9Y5X9 500 aa10.58□□□□□ -0.72
NPHP4-202ENST00000378161 AHRRA9YTQ3 701 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 K7EP13 123 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 CCL25O15444 150 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 FURINP09958 794 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 UNQ5815/PRO19632Q6UWF5 114 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 SLCO4C1Q6ZQN7 724 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 MBOAT2Q6ZWT7 520 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 C17orf78Q8N4C9 275 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 HDAC8Q9BY41 377 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 MTHFD2LQ9H903 347 aaPredicted RBP10.57□□□□□ -0.72
NPHP4-202ENST00000378161 TMEM100Q9NV29 134 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 PPIL1Q9Y3C6 166 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 MED19A0JLT2 244 aaPredicted RBP10.57□□□□□ -0.72
NPHP4-202ENST00000378161 C1orf105O95561 183 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 DUS4LO95620 317 aaKnown RBP10.57□□□□□ -0.72
NPHP4-202ENST00000378161 Q499Y3 187 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF684Q5T5D7 378 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms