RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 H2BFWTQ7Z2G1 175 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 ZNF573Q86YE8 665 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 MED9Q9NWA0 146 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 GNG13Q9P2W3 67 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 NYNRINQ9P2P1 1898 aaKnown RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 ATG2BQ96BY7 2078 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 TCF20Q9UGU0 1960 aaKnown RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 KCNJ3P48549 501 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 OR2B8PP59922 312 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 C19orf57Q0VDD7 668 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 KCNAB1Q14722 419 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 ZNF79Q15937 498 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 MRM1Q6IN84 353 aaKnown RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 LSRQ86X29 649 aaPredicted RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 C10orf111Q8N326 155 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 STPG2Q8N412 459 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 CIB3Q96Q77 187 aaPredicted RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 CABLES2Q9BTV7 478 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 ZNF107Q9UII5 783 aaPredicted RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 TRPM6Q9BX84 2022 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 RAB4AP20338 218 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 RNF4P78317 190 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 SFTPA1Q8IWL2 248 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 C9orf62Q8N4C0 152 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 TMEM178AQ8NBL3 297 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 OR4S1Q8NGB4 309 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 OR1N1Q8NGS0 311 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 KCNE4Q8WWG9 221 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 NTNG2Q96CW9 530 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 SCMH1Q96GD3 660 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 NARFLQ9H6Q4 476 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 IFT22Q9H7X7 185 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 UBE2ZQ9H832 354 aaPredicted RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 SLC52A3Q9NQ40 469 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 LIN7CQ9NUP9 197 aaKnown RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 ZNF391Q9UJN7 358 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 LAMP3Q9UQV4 416 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 DOCK4Q8N1I0 1966 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 DENND4AQ7Z401 1863 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 LMO7DNF2Z398 122 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 BHLHE40O14503 412 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 CTSVO60911 334 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 GABRA1P14867 456 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 SELEP16581 610 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 PTAFRP25105 342 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 ARR3P36575 388 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 METAP1P53582 386 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 VN1R4Q7Z5H5 301 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 OSR2Q8N2R0 312 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 OR10P1Q8NGE3 313 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 FBLIM1Q8WUP2 373 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 CORO2AQ92828 525 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 SAT2Q96F10 170 aaPredicted RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 ACTR3CQ9C0K3 210 aaPredicted RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 ZNF275Q9NSD4 429 aaPredicted RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 ST3GAL6Q9Y274 331 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 POMT1Q9Y6A1 747 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 MIA3Q5JRA6 1907 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 MPC2O95563 127 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 OR8U8P0C7N1 319 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 IL9P15248 144 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 GLB1P16278 677 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 HIST1H1DP16402 221 aaKnown RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 DTYMKP23919 212 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 FCARP24071 287 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 CDKN2AP42771 156 aaKnown RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 FUT6P51993 359 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 CLDN15P56746 228 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 CLN3Q13286 438 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 TMEM215Q68D42 235 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 TMED3Q9Y3Q3 217 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 NUP210Q8TEM1 1887 aaPredicted RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 TMEM272A0A1B0GTI8 110 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 ALG1L2C9J202 215 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 SFT2D2O95562 160 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 CD96P40200 585 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 DVL1P1P54792 670 aaPredicted RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 ELLP55199 621 aaPredicted RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 LCN15Q6UWW0 184 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 SLC38A6Q8IZM9 456 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 SLC35G3Q8N808 338 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 LSMEM1Q8N8F7 131 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 ZNF439Q8NDP4 499 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 NOXO1Q8NFA2 376 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 TVP23CQ96ET8 276 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 PPP1R3EQ9H7J1 279 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 GAR1Q9NY12 217 aaKnown RBP7.52□□□□□ -1.21
VPS36-201ENST00000378060 FBXO4Q9UKT5 387 aa7.52□□□□□ -1.21
VPS36-201ENST00000378060 C9orf170A2RU37 121 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 RAB27BO00194 218 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 SH2D1BO14796 132 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 B3GALNT1O75752 331 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 EPPINO95925 133 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 ZGLP1P0C6A0 271 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PGA3P0DJD8 388 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 PTHLHP12272 177 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 COX5AP20674 150 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 FUT3P21217 361 aa7.51□□□□□ -1.21
VPS36-201ENST00000378060 GPR3P46089 330 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms