RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 FGF16O43320 207 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 HTR3BO95264 441 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 DUX4L2P0CJ85 424 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 DUX4L3P0CJ86 424 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 DUX4L4P0CJ87 422 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 DUX4L5P0CJ88 424 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 DUX4L6P0CJ89 424 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 DUX4L7P0CJ90 424 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 FAHP16930 419 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 CXCL12P48061 93 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 ACTBL2Q562R1 376 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 OR51T1Q8NGJ9 327 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 OR5H2Q8NGV7 314 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 LRRC46Q96FV0 321 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 PGAM5Q96HS1 289 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 URM1Q9BTM9 101 aaKnown RBP9.59□□□□□ -0.87
BEST1-201ENST00000378043 DUSP23Q9BVJ7 150 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 NELFAQ9H3P2 528 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.59□□□□□ -0.87
BEST1-201ENST00000378043 DUX4Q9UBX2 424 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 FLVCR1Q9Y5Y0 555 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 IGKV1D-8A0A087WSZ0 117 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 FAM74A7A6NL05 159 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 HPNP05981 417 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 DBHP09172 617 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 CCL3P10147 92 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 CTRB1P17538 263 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 AMY2BP19961 511 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 MSR1P21757 451 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 GLRA1P23415 457 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 FPR2P25090 351 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 OTX1P32242 354 aaPredicted RBP9.59□□□□□ -0.87
BEST1-201ENST00000378043 SNU13P55769 128 aaKnown RBP9.59□□□□□ -0.87
BEST1-201ENST00000378043 FAM74A3Q4VXF1 159 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 C10orf128Q5T292 105 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 CTRB2Q6GPI1 263 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 LRRC18Q8N456 261 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 TMEM54Q969K7 222 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 ZNF837Q96EG3 531 aaPredicted RBP9.59□□□□□ -0.87
BEST1-201ENST00000378043 OR10C1Q96KK4 312 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 ZNF160Q9HCG1 818 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 RAB18Q9NP72 206 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 V9GYS6 101 aa9.59□□□□□ -0.87
BEST1-201ENST00000378043 LOC102723996A0A087X1L8 192 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 A0A0U1RQV5 110 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 TOR1AO14656 332 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 TLX3O43711 291 aaPredicted RBP9.58□□□□□ -0.88
BEST1-201ENST00000378043 ZIC3O60481 467 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 WDPCPO95876 746 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 FKBP2P26885 142 aaKnown RBP9.58□□□□□ -0.88
BEST1-201ENST00000378043 BLVRBP30043 206 aaPredicted RBP9.58□□□□□ -0.88
BEST1-201ENST00000378043 CSNK1A1P48729 337 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 ZNF133P52736 654 aaPredicted RBP9.58□□□□□ -0.88
BEST1-201ENST00000378043 HIST1H3AP68431 136 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 DEFA5Q01523 94 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 MC2RQ01718 297 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 HIST2H3PS2Q5TEC6 136 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 FOXL2NBQ6ZUU3 175 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 HIST2H3AQ71DI3 136 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 SLC16A14Q7RTX9 510 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 TMEM17Q86X19 198 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 TMEM123Q8N131 208 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 SLC30A7Q8NEW0 376 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 GJC3Q8NFK1 279 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 MARC2Q969Z3 335 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 SHDQ96IW2 340 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 PIGMQ9H3S5 423 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 TMEM100Q9NV29 134 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 TP53I11O14683 189 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 DHRS3O75911 302 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 UMODP07911 640 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 LYL1P12980 280 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 SERPINA2P20848 420 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 SLC6A9P48067 706 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 AKR1C2P52895 323 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 CYCSP99999 105 aaKnown RBP9.58□□□□□ -0.88
BEST1-201ENST00000378043 AKR1C1Q04828 323 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 IL15RAQ13261 267 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
BEST1-201ENST00000378043 IMMP1LQ96LU5 166 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 PECRQ9BY49 303 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 TRIOBPQ9H2D6 2365 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 NCKAP5O14513 1909 aa9.58□□□□□ -0.88
BEST1-201ENST00000378043 FRYQ5TBA9 3013 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 TNRC6BQ9UPQ9 1833 aaKnown RBP9.57□□□□□ -0.88
BEST1-201ENST00000378043 IGHV1-45A0A0A0MS14 117 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 PMS2P1A4D2B8 440 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 ATP6V1G2-DDX39BF2Z307 99 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 G3V3Y1 287 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 MSTNO14793 375 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 ACTL6AO96019 429 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 THBS4P35443 961 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 CBX5P45973 191 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 CSNK2A1P68400 391 aaPredicted RBP9.57□□□□□ -0.88
BEST1-201ENST00000378043 Q6ZSR3 168 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 Q7L0L9 218 aa9.57□□□□□ -0.88
BEST1-201ENST00000378043 BAP18Q8IXM2 172 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms