RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CLEC2DQ9UHP7 191 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 CACNG2Q9Y698 323 aa11.18□□□□□ -0.62
CKAP2-202ENST00000378034 FLNAP21333 2647 aaKnown RBP11.18□□□□□ -0.62
CKAP2-202ENST00000378034 LOC100289279A0A1B0GTE1 492 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 LOC107986453A0A1B0GWG9 222 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 TMEM210A6NLX4 147 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 PTGES3LE9PB15 166 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 FSTL3O95633 263 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 FAHP16930 419 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 C21orf33P30042 268 aaPredicted RBP11.17□□□□□ -0.62
CKAP2-202ENST00000378034 SLC35A2P78381 396 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 CEACAM21Q3KPI0 293 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 CLVS2Q5SYC1 327 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 OR2G6Q5TZ20 316 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 TMEM42Q69YG0 159 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 MOGAT3Q86VF5 341 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 ZNF676Q8N7Q3 588 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 CDCA4Q9BXL8 241 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 COMMD4Q9H0A8 199 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 PLEKHA1Q9HB21 404 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 TRIM36Q9NQ86 728 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 BLOC1S6Q9UL45 172 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 HHLA2Q9UM44 414 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 ERGIC3Q9Y282 383 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 PCDHGB5Q9Y5G0 923 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 HIVEP1P15822 2718 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 VPS13CQ709C8 3753 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 CELSR1Q9NYQ6 3014 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 TRBV2A0A0J9YWF9 115 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 E9PI62 339 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 TMEM178BH3BS89 294 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 MYL12BO14950 172 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 NRASP01111 189 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 IRF2P14316 349 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 TAS2R43P59537 309 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 FAM76BQ5HYJ3 339 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 BIVMQ86UB2 503 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 ZNF485Q8NCK3 441 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 OR5A2Q8NGI9 324 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 OR5AK2Q8NH90 309 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 RPS4Y2Q8TD47 263 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 DVL3Q92997 716 aaPredicted RBP11.17□□□□□ -0.62
CKAP2-202ENST00000378034 TECTBQ96PL2 329 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 TREM2Q9NZC2 230 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 WIPI2Q9Y4P8 454 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 NPTNQ9Y639 398 aa11.17□□□□□ -0.62
CKAP2-202ENST00000378034 IGHV4-61A0A0C4DH41 118 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 OR5B21A6NL26 309 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 SMAD7O15105 426 aaKnown RBP11.16□□□□□ -0.62
CKAP2-202ENST00000378034 OGG1O15527 345 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 HEXAP06865 529 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 CRHBPP24387 322 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 WNT4P56705 351 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 CDK5R1Q15078 307 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 PRAMEF6Q5VXH4 476 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 NANOGP1Q8N7R0 232 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 OR1M1Q8NGA1 313 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 GATAD2BQ8WXI9 593 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 PP6455Q8WZ26 134 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 RNF170Q96K19 258 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 MND1Q9BWT6 205 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 TLNRD1Q9H1K6 362 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 CR1P17927 2039 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 GATBO75879 557 aaKnown RBP11.16□□□□□ -0.62
CKAP2-202ENST00000378034 ZFPL1O95159 310 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 SERPINA3P01011 423 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 GRPP07492 148 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 PMELP40967 661 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 GNG3P63215 75 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 MPPED2Q15777 294 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 MOB3CQ70IA8 216 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 ZNF420Q8TAQ5 688 aaPredicted RBP11.16□□□□□ -0.62
CKAP2-202ENST00000378034 HPSE2Q8WWQ2 592 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 PPP1R3EQ9H7J1 279 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 RNF7Q9UBF6 113 aa11.16□□□□□ -0.62
CKAP2-202ENST00000378034 ANKRD61A6NGH8 418 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 RGS10O43665 173 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 IGHV2-70P01814 119 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 CFHR2P36980 270 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 GTF2A1P52655 376 aaPredicted RBP11.15□□□□□ -0.62
CKAP2-202ENST00000378034 BTG1P62324 171 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 BDH1Q02338 343 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 ZNF154Q13106 437 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 PLCXD3Q63HM9 321 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 MUC20Q8N307 709 aaPredicted RBP11.15□□□□□ -0.62
CKAP2-202ENST00000378034 SMIM19Q96E16 107 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 YTHDF1Q9BYJ9 559 aaKnown RBP11.15□□□□□ -0.62
CKAP2-202ENST00000378034 CHST5Q9GZS9 411 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 UFSP2Q9NUQ7 469 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 PAK1IP1Q9NWT1 392 aaPredicted RBP11.15□□□□□ -0.62
CKAP2-202ENST00000378034 C1orf123Q9NWV4 160 aa11.15□□□□□ -0.62
CKAP2-202ENST00000378034 IGHV3-64DA0A0J9YX35 117 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 LRP5LA4QPB2 252 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 A6NLC8 198 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF20P17024 532 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 CPT2P23786 658 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 THBS2P35442 1172 aa11.14□□□□□ -0.63
CKAP2-202ENST00000378034 MDH2P40926 338 aaKnown RBP11.14□□□□□ -0.63
CKAP2-202ENST00000378034 ACSM1Q08AH1 577 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms