RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 M0R135 149 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 CHRM2P08172 466 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 B4GALT1P15291 398 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 PTGFRP43088 359 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 SLC35A1P78382 337 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 DOK3Q7L591 496 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 ZNF799Q96GE5 643 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 UQCC2Q9BRT2 126 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 PCDHGA1Q9Y5H4 931 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 EP300Q09472 2414 aaPredicted RBP11.38□□□□□ -0.59
USP11-204ENST00000377107 A0A0A6YYH2 397 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 IGKV1-9A0A0C4DH69 117 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 A0A1B0GTQ1 180 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 A6NJ64 397 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 HSPB6O14558 160 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 MSR1P21757 451 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 ITGA3P26006 1051 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 TSPO2Q5TGU0 170 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 KMT5CQ86Y97 462 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 IFI44Q8TCB0 444 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 OIT3Q8WWZ8 545 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 ZNF2Q9BSG1 426 aaPredicted RBP11.38□□□□□ -0.59
USP11-204ENST00000377107 FAAP24Q9BTP7 215 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 MRPL13Q9BYD1 178 aaKnown RBP11.38□□□□□ -0.59
USP11-204ENST00000377107 C5orf66Q9H5L9 145 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 RASL12Q9NYN1 266 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 DUS4LO95620 317 aaKnown RBP11.38□□□□□ -0.59
USP11-204ENST00000377107 CRHP06850 196 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 MSX1P28360 303 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 IAH1Q2TAA2 248 aaPredicted RBP11.38□□□□□ -0.59
USP11-204ENST00000377107 PGAP1Q75T13 922 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 CCDC36Q8IYA8 594 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 NECAB3Q96P71 396 aaPredicted RBP11.38□□□□□ -0.59
USP11-204ENST00000377107 SLC25A32Q9H2D1 315 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 ZNF581Q9P0T4 197 aa11.38□□□□□ -0.59
USP11-204ENST00000377107 NXT1Q9UKK6 140 aaKnown RBP11.38□□□□□ -0.59
USP11-204ENST00000377107 FGF2P09038 288 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 TPT1P13693 172 aaKnown RBP11.37□□□□□ -0.59
USP11-204ENST00000377107 SUMO3P55854 103 aaPredicted RBP11.37□□□□□ -0.59
USP11-204ENST00000377107 PPIAP62937 165 aaKnown RBP11.37□□□□□ -0.59
USP11-204ENST00000377107 HAGHLQ6PII5 290 aaPredicted RBP11.37□□□□□ -0.59
USP11-204ENST00000377107 DRAM2Q6UX65 266 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 GJC3Q8NFK1 279 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 MARC2Q969Z3 335 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 OR10C1Q96KK4 312 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 OR51B6Q9H340 312 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 CEP250Q9BV73 2442 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 NSG1A0A0A6YYJ2 146 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 TUBAL3A6NHL2 446 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 OR6C65A6NJZ3 312 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 EPHA8P29322 1005 aaPredicted RBP11.37□□□□□ -0.59
USP11-204ENST00000377107 UBE2V2Q15819 145 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 ABCA11PQ4W5N1 156 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 RPS19BP1Q86WX3 136 aaKnown RBP11.37□□□□□ -0.59
USP11-204ENST00000377107 NEK7Q8TDX7 302 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 RRNAD1Q96FB5 475 aaKnown RBP11.37□□□□□ -0.59
USP11-204ENST00000377107 CHRNA10Q9GZZ6 450 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 EML6Q6ZMW3 1958 aa11.37□□□□□ -0.59
USP11-204ENST00000377107 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 A8MXK9 166 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 ZNF84P51523 738 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 SHBQ15464 509 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 ANKRD55Q3KP44 614 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 PLEKHN1Q494U1 663 aaPredicted RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 ZNF774Q6NX45 483 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 LPCAT3Q6P1A2 487 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 ZDHHC22Q8N966 263 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 OR13G1Q8NGZ3 307 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 OR6X1Q8NH79 312 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 PIGCQ92535 297 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 CRLF2Q9HC73 371 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 FLVCR1Q9Y5Y0 555 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 DHHO43323 396 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 AKR1C3P42330 323 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 ASCL1P50553 236 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 SNAI3Q3KNW1 292 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 ZNF468Q5VIY5 522 aaPredicted RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 SULF2Q8IWU5 870 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 DTWD2Q8NBA8 298 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 MAFAQ8NHW3 353 aaPredicted RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 HLA-CQ95604 372 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 MLXQ9UH92 298 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 CNOT1A5YKK6 2376 aaKnown RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 TPPPO94811 219 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 DIRAS3O95661 229 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 RCC1P18754 421 aaPredicted RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 PTGDSP41222 190 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 RPL35P42766 123 aaKnown RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 HTR5AP47898 357 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 ID4P47928 161 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 GUCA2BQ16661 112 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 SLC25A47Q6Q0C1 308 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 MEX3BQ6ZN04 569 aaKnown RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 HSD17B13Q7Z5P4 300 aaPredicted RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 BAP18Q8IXM2 172 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 ZSCAN4Q8NAM6 433 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms