RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SLC5A10A0PJK1 596 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 C19orf67A6NJJ6 358 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 IGHV3-9P01782 118 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 IL5P05113 134 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 IGFBP1P08833 259 aaPredicted RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SMIM17P0DL12 118 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 GABRB1P18505 474 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 LIPAP38571 399 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 GZMKP49863 264 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 RTP5Q14D33 572 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 GUK1Q16774 197 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF789Q5FWF6 425 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 DHRS11Q6UWP2 260 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 LYG2Q86SG7 212 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 DND1Q8IYX4 353 aaKnown RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ZBTB44Q8NCP5 570 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 OPALINQ96PE5 141 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 OR5M11Q96RB7 305 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 FAM103A1Q9BTL3 118 aaKnown RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SLC25A19Q9HC21 320 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 PARD6AQ9NPB6 346 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ACOT8O14734 319 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SH2D1BO14796 132 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 DOK2O60496 412 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 CTNSO60931 367 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 OR2J2O76002 312 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 KIR2DL1P43626 348 aaPredicted RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 NOVP48745 357 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 CSRP3P50461 194 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 INSM1Q01101 510 aaPredicted RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 TBR1Q16650 682 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 RIF1Q5UIP0 2472 aaKnown RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 MFSD12Q6NUT3 480 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 TMED6Q8WW62 240 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 AQP7O14520 342 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 HSD17B6O14756 317 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SLCO2B1O94956 709 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 PTBP3O95758 552 aaKnown RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 NID1P14543 1247 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 GPR12P47775 334 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 PHLDA2Q53GA4 152 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SLC48A1Q6P1K1 146 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 C2CD4CQ8TF44 421 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 WBP2Q969T9 261 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 MVB12AQ96EY5 273 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 TIMM10BQ9Y5J6 103 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 MPGP29372 298 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ARR3P36575 388 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 C1orf220Q5T0J3 134 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 C1orf185Q5T7R7 199 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SP5Q6BEB4 398 aaPredicted RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 WDR74Q6RFH5 385 aaPredicted RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SLCO4C1Q6ZQN7 724 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ABI3BPQ7Z7G0 1075 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 FAM71CQ8NEG0 241 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SORBS1Q9BX66 1292 aaKnown RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 COMMD5Q9GZQ3 224 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SPNS1Q9H2V7 528 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 IKZF5Q9H5V7 419 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 LOC107986453A0A1B0GWG9 222 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF320A2RRD8 509 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 J3KTA2 159 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 DEDDO75618 318 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 PNLIPP16233 465 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ALOX5APP20292 161 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ACP1P24666 158 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 PIGAP37287 484 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF83P51522 516 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 LIMK1P53667 647 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 EDDM3BP56851 147 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 EXOSC2Q13868 293 aaKnown RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 AANATQ16613 207 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 MRGPREQ86SM8 312 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 LRRTM1Q86UE6 522 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF573Q86YE8 665 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 PIANPQ8IYJ0 282 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ARRDC1Q8N5I2 433 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ARRDC2Q8TBH0 407 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 DNASE2BQ8WZ79 361 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 PIGTQ969N2 578 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF2Q9BSG1 426 aaPredicted RBP5.67□□□□□ -1.5
PTPN3-202ENST00000374541 C20orf24Q9BUV8 137 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 WWTR1Q9GZV5 400 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 SLC17A5Q9NRA2 495 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 NUMA1Q14980 2115 aa5.67□□□□□ -1.5
PTPN3-202ENST00000374541 GFYI3L273 518 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF154Q13106 437 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM123Q8N131 208 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 LRRC18Q8N456 261 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM104Q8NE00 496 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM174Q8WUU8 243 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ST8SIA2Q92186 375 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CHST6Q9GZX3 395 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 FAM234AQ9H0X4 552 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 WDR81Q562E7 1941 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 A0A0B4J203 849 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 LRRC3CA6NJW4 275 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 KRTDAPP60985 99 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SPCS3P61009 180 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ELAVL1Q15717 326 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms