RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TMEM185AQ8NFB2 350 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 OR1S1Q8NH92 325 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 TERB2Q8NHR7 220 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 ST8SIA4Q92187 359 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 MRGPRFQ96AM1 343 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 NTNG2Q96CW9 530 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 VRK1Q99986 396 aaPredicted RBP12.27□□□□□ -0.44
HMGCL-203ENST00000374490 OR10A2Q9H208 303 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 ZNF160Q9HCG1 818 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 RASL12Q9NYN1 266 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 V9GYS6 101 aa12.27□□□□□ -0.44
HMGCL-203ENST00000374490 OR2AT4A6NND4 320 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 NPIPA2E9PIF3 369 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 NPIPA3F8WFD2 350 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 MFNGO00587 321 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 CRTAPO75718 401 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-203ENST00000374490 PMP2P02689 132 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 OPN1LWP04000 364 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 FREM3P0C091 2139 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 SLC2A1P11166 492 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 LIFP15018 202 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 VAMP1P23763 118 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 OR3A4PP47883 348 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 STARP49675 285 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 SSR4P51571 173 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 SUCLG1P53597 346 aaKnown RBP12.26□□□□□ -0.45
HMGCL-203ENST00000374490 HIST1H3AP68431 136 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 TAGLNQ01995 201 aaKnown RBP12.26□□□□□ -0.45
HMGCL-203ENST00000374490 INPP5JQ15735 1006 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-203ENST00000374490 SGCAQ16586 387 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 CCDC157Q569K6 752 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 TMEM128Q5BJH2 165 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 HIST2H3PS2Q5TEC6 136 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 PRAMEF20Q5VT98 475 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 HIST2H3AQ71DI3 136 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 FAM89BQ8N5H3 189 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 INO80EQ8NBZ0 244 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-203ENST00000374490 OR5H2Q8NGV7 314 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 PPP1R1CQ8WVI7 109 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 IMMP1LQ96LU5 166 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 ZNF416Q9BWM5 594 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 NMES1Q9C002 83 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 STRADBQ9C0K7 418 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 DKKL1Q9UK85 242 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 FLVCR1Q9Y5Y0 555 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 PCNX3Q9H6A9 2034 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 A0A0A6YYD4 124 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 DBX1A6NMT0 343 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 MTRF1O75570 445 aaKnown RBP12.26□□□□□ -0.45
HMGCL-203ENST00000374490 DHRS3O75911 302 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 IGHEP01854 428 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 RLN2P04090 185 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 COX6A1P12074 109 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 FPR2P25090 351 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 ZNF84P51523 738 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 MICBQ29980 383 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 CCDC36Q8IYA8 594 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 PAQR8Q8TEZ7 354 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 LINC00052Q96N35 136 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 NICN1Q9BSH3 213 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 SLC39A1Q9NY26 324 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 ZNF230Q9UIE0 474 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-203ENST00000374490 ASPMQ8IZT6 3477 aa12.26□□□□□ -0.45
HMGCL-203ENST00000374490 KIF26BQ2KJY2 2108 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 LOC105371267A0A1B0GV96 52 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 POM121CA8CG34 1229 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 SERPINE3A8MV23 424 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 B4E171 279 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 CCSO14618 274 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 SOCS1O15524 211 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 DHHO43323 396 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 RAMP1O60894 148 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 CCL4P13236 92 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 AKR1C4P17516 323 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 TSPAN7P41732 249 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 ECI1P42126 302 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 ATP1B3P54709 279 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 ARFRP1Q13795 201 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 ENDOGQ14249 297 aaKnown RBP12.25□□□□□ -0.45
HMGCL-203ENST00000374490 SURF2Q15527 256 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-203ENST00000374490 SLC22A6Q4U2R8 563 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 PLAC9Q5JTB6 97 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 TMEM104Q8NE00 496 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 OR9K2Q8NGE7 335 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 MARCH1Q8TCQ1 289 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 CASTOR1Q8WTX7 329 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 MR1Q95460 341 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 SPTSSAQ969W0 71 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 CPNE2Q96FN4 548 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-203ENST00000374490 ARPC5LQ9BPX5 153 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 SF3B5Q9BWJ5 86 aaKnown RBP12.25□□□□□ -0.45
HMGCL-203ENST00000374490 TM2D1Q9BX74 207 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 SH2D2AQ9NP31 389 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 RAB18Q9NP72 206 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 ZNF319Q9P2F9 582 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 GPR132Q9UNW8 380 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 PTRH2Q9Y3E5 179 aaKnown RBP12.25□□□□□ -0.45
HMGCL-203ENST00000374490 PCDHGA1Q9Y5H4 931 aa12.25□□□□□ -0.45
HMGCL-203ENST00000374490 LOC100509620A0A075B734 347 aa12.24□□□□□ -0.45
HMGCL-203ENST00000374490 RNF222A6NCQ9 220 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms