RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 NPRL2Q8WTW4 380 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 RAB3CQ96E17 227 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 FBXO17Q96EF6 278 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 ELMOD3Q96FG2 381 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 WDR89Q96FK6 387 aaPredicted RBP10.59□□□□□ -0.71
HMGCL-202ENST00000374487 LYZL4Q96KX0 146 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 LPAR5Q9H1C0 372 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 B3GNT2Q9NY97 397 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 LRFN1Q9P244 771 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 OPN4Q9UHM6 478 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 FLVCR1Q9Y5Y0 555 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 PIEZO2Q9H5I5 2752 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 IGKV1-9A0A0C4DH69 117 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 PLSCR5A0PG75 271 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 ARGFXA6NJG6 315 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 DBHP09172 617 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 UBBP0CG47 229 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 GMFBP60983 142 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 HIST1H3AP68431 136 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 KISS1Q15726 138 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 C2orf68Q2NKX9 166 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 ATPAF1Q5TC12 328 aaPredicted RBP10.59□□□□□ -0.71
HMGCL-202ENST00000374487 HIST2H3PS2Q5TEC6 136 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 SPINK14Q6IE38 97 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 HIST2H3AQ71DI3 136 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 GPR137CQ8N3F9 429 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 C12orf45Q8N5I9 185 aaPredicted RBP10.59□□□□□ -0.71
HMGCL-202ENST00000374487 OR10D3Q8NH80 312 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 OR2V1Q8NHB1 315 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 ADAMTS17Q8TE56 1095 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 PP6455Q8WZ26 134 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 S100A13Q99584 98 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 URM1Q9BTM9 101 aaKnown RBP10.59□□□□□ -0.71
HMGCL-202ENST00000374487 GPR87Q9BY21 358 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 DEPPQ9NTK1 212 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 PIGLQ9Y2B2 252 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 KCNK7Q9Y2U2 307 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 ATRXP46100 2492 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 H3BUI4 141 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 SGCEO43556 437 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 MPC2O95563 127 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 FAHP16930 419 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 CNR1P21554 472 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 HRH1P35367 487 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 THBS4P35443 961 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 RSPO1Q2MKA7 263 aaPredicted RBP10.58□□□□□ -0.72
HMGCL-202ENST00000374487 OR56B1Q8NGI3 324 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 OR52H1Q8NGJ2 320 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 OR5D18Q8NGL1 313 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 PSMF1Q92530 271 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 CST11Q9H112 138 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 OR10A2Q9H208 303 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 SLC2A8Q9NY64 477 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 UBQLN2Q9UHD9 624 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 BOKQ9UMX3 212 aaPredicted RBP10.58□□□□□ -0.72
HMGCL-202ENST00000374487 OR14I1A6ND48 311 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 SOCS1O15524 211 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 RGS11O94810 467 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 GSTP1P09211 210 aaKnown RBP10.58□□□□□ -0.72
HMGCL-202ENST00000374487 OTX1P32242 354 aaPredicted RBP10.58□□□□□ -0.72
HMGCL-202ENST00000374487 CASRP41180 1078 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 PTGFRP43088 359 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 OPCMLQ14982 345 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 MPPED2Q15777 294 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 CLVS2Q5SYC1 327 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 ABHD17BQ5VST6 288 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 OR13C8Q8NGS7 320 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 C1orf147Q96MC9 270 aaPredicted RBP10.58□□□□□ -0.72
HMGCL-202ENST00000374487 TMPRSS13Q9BYE2 586 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 MYOZ1Q9NP98 299 aaPredicted RBP10.58□□□□□ -0.72
HMGCL-202ENST00000374487 MRPS18CQ9Y3D5 142 aaKnown RBP10.58□□□□□ -0.72
HMGCL-202ENST00000374487 MAB21L2Q9Y586 359 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 KCNMB2Q9Y691 235 aa10.58□□□□□ -0.72
HMGCL-202ENST00000374487 KALRNO60229 2985 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 CACNA1GO43497 2377 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 FXYD6-FXYD2A0A087WZ82 144 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 A0A1W2PP11 408 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF716A6NP11 495 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 ARPC5O15511 151 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 IGLV3-1P01715 115 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 HLA-AP01891 365 aaKnown RBP10.57□□□□□ -0.72
HMGCL-202ENST00000374487 FCGR2AP12318 317 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 PRF1P14222 555 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 HIST1H1DP16402 221 aaKnown RBP10.57□□□□□ -0.72
HMGCL-202ENST00000374487 CXCL2P19875 107 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 TBPP20226 339 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 NTF4P34130 210 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 RAB14P61106 215 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 SEC61A1P61619 476 aaKnown RBP10.57□□□□□ -0.72
HMGCL-202ENST00000374487 DHODHQ02127 395 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 EXOSC2Q13868 293 aaKnown RBP10.57□□□□□ -0.72
HMGCL-202ENST00000374487 RAB35Q15286 201 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 ZMYND11Q15326 602 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 UBE2V2Q15819 145 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 PDSS1Q5T2R2 415 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 DCAF12L2Q5VW00 463 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 LIN54Q6MZP7 749 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 C17orf107Q6ZR85 190 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 OR51T1Q8NGJ9 327 aa10.57□□□□□ -0.72
HMGCL-202ENST00000374487 OR4K15Q8NH41 348 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms