RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GFRA1P56159 465 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 BAMBIQ13145 260 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 MEF2DQ14814 521 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 BATF2Q8N1L9 274 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 PNLDC1Q8NA58 520 aaKnown RBP13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 SSC4DQ8WTU2 575 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 ST8SIA4Q92187 359 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 RADILQ96JH8 1075 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 FOXB1Q99853 325 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 PRRT1Q99946 306 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 ZPBPQ9BS86 351 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 DDA1Q9BW61 102 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 SLC6A15Q9H2J7 730 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 PRR13Q9NZ81 148 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 SDCBPO00560 298 aaPredicted RBP13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 SPRY1O43609 319 aaPredicted RBP13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 SYNGR3O43761 229 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 PPP3CBP16298 524 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 CNR1P21554 472 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 GABRR1P24046 479 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 CD34P28906 385 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 PSG4Q00888 419 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 TMEM164Q5U3C3 297 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 OR2M7Q8NG81 312 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 REEP6Q96HR9 211 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 EDEM2Q9BV94 578 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 ARL6Q9H0F7 186 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 OR10A2Q9H208 303 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 V9GYS6 101 aa13.96□□□□□ -0.18
CNKSR1-202ENST00000374253 A0A096LPE4 126 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 A0A0U1RQV5 110 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 A0A1W2PPZ6 126 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 H3BUI4 141 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 TNFSF15O95150 251 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 BLVRBP30043 206 aaPredicted RBP13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 NPY4RP50391 375 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 ATXN7L3Q14CW9 347 aaPredicted RBP13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 OR1C1Q15619 314 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 DCAF10Q5QP82 559 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 PLA2G2CQ5R387 149 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 HES3Q5TGS1 186 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 KCTD9Q7L273 389 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 SLC16A14Q7RTX9 510 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 SULF2Q8IWU5 870 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 SKA3Q8IX90 412 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 OR1F12Q8NHA8 337 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 FBXW5Q969U6 566 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 CHST5Q9GZS9 411 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 B3GNT2Q9NY97 397 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 UBQLN2Q9UHD9 624 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 PLEKHA6Q9Y2H5 1048 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 POM121CA8CG34 1229 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 HTR3BO95264 441 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 CHRM2P08172 466 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 CRYGSP22914 178 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 THBS4P35443 961 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 FOXG1P55316 489 aaPredicted RBP13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 NKAPLQ5M9Q1 402 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 TSPO2Q5TGU0 170 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 ABLIM2Q6H8Q1 611 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 OR2W3Q7Z3T1 314 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 GALNTL5Q7Z4T8 443 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 CDH26Q8IXH8 852 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 INTS12Q96CB8 462 aaKnown RBP13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 S100A13Q99584 98 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 ALX4Q9H161 411 aaPredicted RBP13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 FBLN5Q9UBX5 448 aa13.95□□□□□ -0.18
CNKSR1-202ENST00000374253 TEX46H3BTG2 121 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 IFNA7P01567 189 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 TMEM225BP0DP42 221 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 PRF1P14222 555 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 MTCP1P56278 107 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 RAB35Q15286 201 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 ALKAL2Q6UX46 152 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 OR56B1Q8NGI3 324 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 PDCD10Q9BUL8 212 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 CALHM2Q9HA72 323 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 GPR35Q9HC97 309 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 BOKQ9UMX3 212 aaPredicted RBP13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 RPS10-NUDT3A0A1W2PQS6 291 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 CCL2P13500 99 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 CCNOP22674 350 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 RPS27AP62979 156 aaKnown RBP13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 IL13RA1P78552 427 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 TGIF1Q15583 401 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 TMUB2Q71RG4 321 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 C6orf201Q7Z4U5 140 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 SEMA6DQ8NFY4 1073 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 HDHD3Q9BSH5 251 aaPredicted RBP13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 URM1Q9BTM9 101 aaKnown RBP13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 ZNF703Q9H7S9 590 aaPredicted RBP13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 KCNN3Q9UGI6 736 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 PCDHGA1Q9Y5H4 931 aa13.94□□□□□ -0.18
CNKSR1-202ENST00000374253 TRAV14DV4A0A0A6YYC5 116 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 MFNGO00587 321 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 KCNAB3O43448 404 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 HPNP05981 417 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 DHODHQ02127 395 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 HLXQ14774 488 aaPredicted RBP13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 BRICD5Q6PL45 260 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms