RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 RPUSD3Q6P087 351 aaKnown RBP10.89□□□□□ -0.67
PRPF4-202ENST00000374199 TMEM53Q6P2H8 277 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 PXT1Q8NFP0 134 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 SLC25A21Q9BQT8 299 aaPredicted RBP10.89□□□□□ -0.67
PRPF4-202ENST00000374199 ING3Q9NXR8 418 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 FLVCR2Q9UPI3 526 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 FARS2O95363 451 aaKnown RBP10.89□□□□□ -0.67
PRPF4-202ENST00000374199 HTR5AP47898 357 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 VEGFCP49767 419 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 VAX1Q5SQQ9 334 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 FBXW9Q5XUX1 488 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 TFAP2EQ6VUC0 442 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 Q6ZTK2 550 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.89□□□□□ -0.67
PRPF4-202ENST00000374199 FJX1Q86VR8 437 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 OR13C8Q8NGS7 320 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 SNAPC3Q92966 411 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 OPA3Q9H6K4 179 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 MRPL15Q9P015 296 aaKnown RBP10.89□□□□□ -0.67
PRPF4-202ENST00000374199 HSF4Q9ULV5 492 aa10.89□□□□□ -0.67
PRPF4-202ENST00000374199 FAM172BPA6NC97 362 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 MSTNO14793 375 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 CXCL3P19876 107 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 COX5AP20674 150 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 MEF2DQ14814 521 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 CDNFQ49AH0 187 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 SFRP4Q6FHJ7 346 aaPredicted RBP10.88□□□□□ -0.67
PRPF4-202ENST00000374199 FAAP20Q6NZ36 180 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 PLXDC2Q6UX71 529 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 LHFPL2Q6ZUX7 228 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 RTN4RL2Q86UN3 420 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 PRRG4Q9BZD6 226 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 FAM86C1Q9NVL1 165 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 PIPOXQ9P0Z9 390 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 PLEKHA6Q9Y2H5 1048 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 SLC22A20A6NK97 555 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 PYCARD-AS1I3L0S3 204 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 RAD51DO75771 328 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 PRKACBP22694 351 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 Q5BKY6 102 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 OR56B1Q8NGI3 324 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 CACNA1CQ13936 2221 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 TMEM235A6NFC5 223 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 PATE4P0C8F1 98 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 GSTT2P0CG29 244 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 SRYQ05066 204 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 NHLRC3Q5JS37 347 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 ACBD4Q8NC06 268 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 GAL3ST1Q99999 423 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 UPB1Q9UBR1 384 aa10.88□□□□□ -0.67
PRPF4-202ENST00000374199 CACNA1GO43497 2377 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 PQLC2LA1A4F0 135 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 IL2RAP01589 272 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 RAD52P43351 418 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 SLC6A9P48067 706 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 NKX2-5P52952 324 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 CD83Q01151 205 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 CNN3Q15417 329 aaKnown RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 SAXO1Q8IYX7 474 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 ZSCAN4Q8NAM6 433 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 CMBLQ96DG6 245 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 CPNE2Q96FN4 548 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 SLX1AQ9BQ83 275 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 TMEM59Q9BXS4 323 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 FGF23Q9GZV9 251 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 MED28Q9H204 178 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 DLL4Q9NR61 685 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 A6NL46 340 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 A8MV72 311 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 H3BUI4 141 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 ARPC1BO15143 372 aaKnown RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 SOCS1O15524 211 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 HOXB1P14653 301 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF14P17017 642 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 GK2Q14410 553 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 MPPED2Q15777 294 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 C3AR1Q16581 482 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 FAHD2BQ6P2I3 314 aaPredicted RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 Q6ZS92 163 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 CCDC36Q8IYA8 594 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 C9orf62Q8N4C0 152 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 STEAP2Q8NFT2 490 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 OR51S1Q8NGJ8 323 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 OR2AE1Q8NHA4 323 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 MRPS24Q96EL2 167 aaKnown RBP10.87□□□□□ -0.67
PRPF4-202ENST00000374199 FAHD2AQ96GK7 314 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 CST11Q9H112 138 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 CALHM2Q9HA72 323 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 DECR2Q9NUI1 292 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 PRSS50Q9UI38 385 aa10.87□□□□□ -0.67
PRPF4-202ENST00000374199 FIGNL2A6NMB9 653 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 SERPINA5P05154 406 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 GTF2F2P13984 249 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 HLA-GP17693 338 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 CBX5P45973 191 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 SIGIRRQ6IA17 410 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 ELP2Q6IA86 826 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 LHFPL1Q86WI0 220 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 SLC7A5P1Q8MH63 180 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms