RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CNOT2Q9NZN8 540 aaKnown RBP13.47□□□□□ -0.25
HDHD3-202ENST00000374180 PSORS1C1Q9UIG5 152 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 ENPP5Q9UJA9 477 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 LRCH1Q9Y2L9 728 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 V9GYS6 101 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 ISPDA4D126 451 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 H3BSH0 61 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 CYB5R3P00387 301 aaPredicted RBP13.46□□□□□ -0.25
HDHD3-202ENST00000374180 HEXAP06865 529 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 PIPP12273 146 aaPredicted RBP13.46□□□□□ -0.25
HDHD3-202ENST00000374180 CCL1P22362 96 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 MYF6P23409 242 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 CCR9P51686 369 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 NANOS3P60323 173 aaKnown RBP13.46□□□□□ -0.25
HDHD3-202ENST00000374180 MRPL28Q13084 256 aaKnown RBP13.46□□□□□ -0.25
HDHD3-202ENST00000374180 BLMHQ13867 455 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 C6orf141Q5SZD1 244 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 TMEM244Q5VVB8 128 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 CYB5R2Q6BCY4 276 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 Q71RC1 249 aaPredicted RBP13.46□□□□□ -0.25
HDHD3-202ENST00000374180 KRT74Q7RTS7 529 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 ZDHHC23Q8IYP9 409 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 RDH10Q8IZV5 341 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 C1orf87Q8N0U7 546 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 Q8TCH9 128 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 OR5P3Q8WZ94 311 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 RNF170Q96K19 258 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 ZNF184Q99676 751 aaPredicted RBP13.46□□□□□ -0.25
HDHD3-202ENST00000374180 RTL8AQ9BWD3 113 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 ANKRD60Q9BZ19 345 aa13.46□□□□□ -0.25
HDHD3-202ENST00000374180 CAB39Q9Y376 341 aaPredicted RBP13.46□□□□□ -0.25
HDHD3-202ENST00000374180 EXOSC1Q9Y3B2 195 aaKnown RBP13.46□□□□□ -0.25
HDHD3-202ENST00000374180 HIVEP2P31629 2446 aa13.46□□□□□ -0.26
HDHD3-202ENST00000374180 SETD2Q9BYW2 2564 aaPredicted RBP13.45□□□□□ -0.26
HDHD3-202ENST00000374180 A6NLC8 198 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 DHRS7CA6NNS2 312 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 NRASP01111 189 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 IGHV4-31P0DP07 118 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF12P17014 697 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 IL2RGP31785 369 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 GZMKP49863 264 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 ALKBH1Q13686 389 aaKnown RBP13.45□□□□□ -0.26
HDHD3-202ENST00000374180 Q6ZSR3 168 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 KCTD8Q6ZWB6 473 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 MOB3CQ70IA8 216 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 AHSA2Q719I0 299 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 STX19Q8N4C7 294 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 KLHL36Q8N4N3 616 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 CCDC54Q8NEL0 328 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 OR1M1Q8NGA1 313 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 HAVCR2Q8TDQ0 301 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 GAL3ST1Q99999 423 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 PLEKHA1Q9HB21 404 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 C1orf123Q9NWV4 160 aa13.45□□□□□ -0.26
HDHD3-202ENST00000374180 LOC107986453A0A1B0GWG9 222 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 A6NIN4 97 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 E9PI62 339 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 IGHV2-70P01814 119 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 ISG15P05161 165 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 CDH15P55291 814 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 LMO4P61968 165 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 BTG1P62324 171 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 ZMYND11Q15326 602 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 CEACAM21Q3KPI0 293 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 CEP78Q5JTW2 689 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 CLVS2Q5SYC1 327 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 OR2G6Q5TZ20 316 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 WDR86Q86TI4 376 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 LRRC28Q86X40 367 aaPredicted RBP13.44□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF676Q8N7Q3 588 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 SCN3BQ9NY72 215 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 RNF7Q9UBF6 113 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 CLEC2DQ9UHP7 191 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 RAB26Q9ULW5 256 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 TANC2Q9HCD6 1990 aa13.44□□□□□ -0.26
HDHD3-202ENST00000374180 hCG_1807616A0A1W2PRN6 198 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 TMEM210A6NLX4 147 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 OR4C45A6NMZ5 311 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 PTGES3LE9PB15 166 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 CD5LO43866 347 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF205O95201 554 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 THBS2P35442 1172 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 GPM6AP51674 278 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF154Q13106 437 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 DMRTC1Q5HYR2 192 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 PLCXD3Q63HM9 321 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF826PQ6ZT77 177 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 OR5A2Q8NGI9 324 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 HPSE2Q8WWQ2 592 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 MSI2Q96DH6 328 aaKnown RBP13.43□□□□□ -0.26
HDHD3-202ENST00000374180 BABAM2Q9NXR7 383 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 UBAP1Q9NZ09 502 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 YLPM1P49750 1951 aaKnown RBP13.43□□□□□ -0.26
HDHD3-202ENST00000374180 ZFHX3Q15911 3703 aa13.43□□□□□ -0.26
HDHD3-202ENST00000374180 NSD1Q96L73 2696 aaPredicted RBP13.43□□□□□ -0.26
HDHD3-202ENST00000374180 SONP18583 2426 aaKnown RBP13.43□□□□□ -0.26
HDHD3-202ENST00000374180 PPIAL4EA0A075B759 164 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 TRBV2A0A0J9YWF9 115 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms