RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 MEIOBQ8N635 442 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 ADPRHL1Q8NDY3 354 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 SFT2D1Q8WV19 159 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 PIGMQ9H3S5 423 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 KLHL13Q9P2N7 655 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 GTF2A1LQ9UNN4 478 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 DHDHQ9UQ10 334 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 RCE1Q9Y256 329 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 R4GMQ9 66 aa12.55□□□□□ -0.4
HMGA1-203ENST00000374116 KIAA1549Q9HCM3 1950 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 RAB19A4D1S5 217 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 XRCC3O43542 346 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 SRSF10O75494 262 aaKnown RBP12.54□□□□□ -0.4
HMGA1-203ENST00000374116 MPZL1O95297 269 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 CD2P06729 351 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 HEXAP06865 529 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 FABP1P07148 127 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 EDN3P14138 238 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 RAD52P43351 418 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 SUCLG1P53597 346 aaKnown RBP12.54□□□□□ -0.4
HMGA1-203ENST00000374116 MFGE8Q08431 387 aaPredicted RBP12.54□□□□□ -0.4
HMGA1-203ENST00000374116 MYBPHQ13203 477 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 C10orf91Q5T1B1 145 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 SVBPQ8N300 66 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 BPIFCQ8NFQ6 507 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 PIGQQ9BRB3 760 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 MYEF2Q9P2K5 600 aaKnown RBP12.54□□□□□ -0.4
HMGA1-203ENST00000374116 CKLFQ9UBR5 152 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 FLVCR2Q9UPI3 526 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 ESPL1Q14674 2120 aa12.54□□□□□ -0.4
HMGA1-203ENST00000374116 ANKRD20A5PA0PJZ0 165 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 SULT1C2O00338 296 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ARPC1BO15143 372 aaKnown RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ARPC5O15511 151 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ABOP16442 354 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 MGMTP16455 207 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 EIF1P41567 113 aaKnown RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 CLDN15P56746 228 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 GMFBP60983 142 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 FMODQ06828 376 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 RAB11BQ15907 218 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 C3orf33Q6P1S2 294 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 CD163Q86VB7 1156 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 SKA3Q8IX90 412 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 RPRMLQ8N4K4 120 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 C12orf45Q8N5I9 185 aaPredicted RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 PRR7Q8TB68 274 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ST7LQ8TDW4 575 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 GLYATL2Q8WU03 294 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ASB5Q8WWX0 329 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 PHYHIPLQ96FC7 376 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 OSGIN2Q9Y236 505 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 CACNA1CQ13936 2221 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 A0A087WZY1 265 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 SLC17A2O00624 439 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 NDUFB6O95139 128 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 RLN2P04090 185 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ISG15P05161 165 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 FSTP19883 344 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 PVALBP20472 110 aaPredicted RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 FKBP2P26885 142 aaKnown RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 LHX2P50458 406 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 SSTP61278 116 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 TMEM225Q6GV28 225 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ELP2Q6IA86 826 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 HAGHLQ6PII5 290 aaPredicted RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 DCXRQ7Z4W1 244 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 GLB1L2Q8IW92 636 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 GTPBP8Q8N3Z3 284 aaPredicted RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ST6GALNAC3Q8NDV1 305 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 ZBTB8AQ96BR9 441 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 OR10A4Q9H209 315 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 BEX1Q9HBH7 125 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 NOX3Q9HBY0 568 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 MED29Q9NX70 200 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 HHLA2Q9UM44 414 aa12.53□□□□□ -0.4
HMGA1-203ENST00000374116 CARHSP1Q9Y2V2 147 aaKnown RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 MRPS18CQ9Y3D5 142 aaKnown RBP12.53□□□□□ -0.4
HMGA1-203ENST00000374116 A0A1W2PNR3 127 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 H3BSH0 61 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 AQP7O14520 342 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 SIX6O95475 246 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 WNT11O96014 354 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 ACAA1P09110 424 aaPredicted RBP12.52□□□□□ -0.41
HMGA1-203ENST00000374116 FOLR2P14207 255 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 IGFBP3P17936 291 aaPredicted RBP12.52□□□□□ -0.41
HMGA1-203ENST00000374116 ACHEP22303 614 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 BIDP55957 195 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 CLDN18P56856 261 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 SWI5Q1ZZU3 235 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 TMEM176BQ3YBM2 270 aaPredicted RBP12.52□□□□□ -0.41
HMGA1-203ENST00000374116 GLT8D1Q68CQ7 371 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 FAM166AQ6J272 317 aa12.52□□□□□ -0.41
HMGA1-203ENST00000374116 LIN54Q6MZP7 749 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms