RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZNF735P0CB33 412 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 PLAC9Q5JTB6 97 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 SLC36A1Q7Z2H8 476 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 GVQW1Q8N7I0 195 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 RGCCQ9H4X1 137 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 ATPIF1Q9UII2 106 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF391Q9UJN7 358 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 ING4Q9UNL4 249 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 URB1O60287 2271 aaKnown RBP17.03■□□□□ 0.32
HDAC1-201ENST00000373548 FAM186AA6NE01 2351 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF503-AS2A6NEH8 195 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 SSX5O60225 188 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 HLA-HP01893 362 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 EDN3P14138 238 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF92Q03936 586 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 CLN3Q13286 438 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 NCCRP1Q6ZVX7 275 aaPredicted RBP17.03■□□□□ 0.32
HDAC1-201ENST00000373548 ZFAND1Q8TCF1 268 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 CST11Q9H112 138 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 DLL3Q9NYJ7 618 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 KCNK7Q9Y2U2 307 aa17.03■□□□□ 0.32
HDAC1-201ENST00000373548 TNRC6AQ8NDV7 1962 aaKnown RBP17.03■□□□□ 0.32
HDAC1-201ENST00000373548 hCG_38984A0A1B0GV85 526 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 SLC22A20A6NK97 555 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 AMY2AP04746 511 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 TMEM50BP56557 158 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 RPS27AP62979 156 aaKnown RBP17.02■□□□□ 0.32
HDAC1-201ENST00000373548 FAM3AP98173 230 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 Q5BKY6 102 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 ZNF626Q68DY1 528 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 RAB3CQ96E17 227 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 URM1Q9BTM9 101 aaKnown RBP17.02■□□□□ 0.32
HDAC1-201ENST00000373548 C1QTNF5Q9BXJ0 243 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 PRDM14Q9GZV8 571 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 PRSS50Q9UI38 385 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 MED12LQ86YW9 2145 aa17.02■□□□□ 0.32
HDAC1-201ENST00000373548 LOC100509620A0A075B734 347 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 FAM172BPA6NC97 362 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 RGS13O14921 159 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 RLN1P04808 185 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 HIST1H1DP16402 221 aaKnown RBP17.02■□□□□ 0.31
HDAC1-201ENST00000373548 AGTR1P30556 359 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 CAMK2BQ13554 666 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 DEFB109BQ30KR1 87 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 FAM89BQ8N5H3 189 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 OR56B1Q8NGI3 324 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 OR10K1Q8NGX5 313 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 SPSB1Q96BD6 273 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 CYYR1Q96J86 154 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 PRRX2Q99811 253 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 GPN1Q9HCN4 374 aaPredicted RBP17.02■□□□□ 0.31
HDAC1-201ENST00000373548 ZNF69Q9UC07 566 aa17.02■□□□□ 0.31
HDAC1-201ENST00000373548 SNRPGP15A8MWD9 76 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 GSTP1P09211 210 aaKnown RBP17.01■□□□□ 0.31
HDAC1-201ENST00000373548 MGMTP16455 207 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 ZNF24P17028 368 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 FAM189A2Q15884 450 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 TMEM42Q69YG0 159 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 IDO2Q6ZQW0 420 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 COLCA1Q6ZS62 124 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 DOCK7Q96N67 2140 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 TMEM246Q9BRR3 403 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 C12orf49Q9H741 205 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 NPTNQ9Y639 398 aa17.01■□□□□ 0.31
HDAC1-201ENST00000373548 XRCC2O43543 280 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 CREBL2O60519 120 aaPredicted RBP17■□□□□ 0.31
HDAC1-201ENST00000373548 IGHG3P01860 377 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 SERPINA2P20848 420 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 OR8B8Q15620 311 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 OR52W1Q6IF63 320 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 BPIFB2Q8N4F0 458 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 OR52B4Q8NGK2 314 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 SPSB4Q96A44 273 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 HYLS1Q96M11 299 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 SLC6A7Q99884 636 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 ZNF175Q9Y473 711 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 ZNF891A8MT65 544 aaPredicted RBP17■□□□□ 0.31
HDAC1-201ENST00000373548 MFNGO00587 321 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 MTCP1P56278 107 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 RTP5Q14D33 572 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 CNN3Q15417 329 aaKnown RBP17■□□□□ 0.31
HDAC1-201ENST00000373548 CLVS2Q5SYC1 327 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 LAMTOR1Q6IAA8 161 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 OR51T1Q8NGJ9 327 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 ARHGAP5-AS1Q96IT6 56 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 IFT46Q9NQC8 304 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 DLL4Q9NR61 685 aa17■□□□□ 0.31
HDAC1-201ENST00000373548 IGKV1-27A0A075B6S5 117 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 FOXI3A8MTJ6 420 aaPredicted RBP16.99■□□□□ 0.31
HDAC1-201ENST00000373548 RAD51DO75771 328 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 GNG2P59768 71 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 MEF2DQ14814 521 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 RNASE10Q5GAN6 216 aaKnown RBP16.99■□□□□ 0.31
HDAC1-201ENST00000373548 S100A13Q99584 98 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 ZNF436Q9C0F3 470 aaPredicted RBP16.99■□□□□ 0.31
HDAC1-201ENST00000373548 CHST6Q9GZX3 395 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 TRAV17A0A0B4J275 112 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 FAM230AA0A1W2PPH8 454 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 OR14I1A6ND48 311 aa16.99■□□□□ 0.31
HDAC1-201ENST00000373548 ZNHIT1O43257 154 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms