RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TERB2Q8NHR7 220 aa20.85■□□□□ 0.93
CDK9-201ENST00000373264 ST8SIA2Q92186 375 aa20.85■□□□□ 0.93
CDK9-201ENST00000373264 PHB2Q99623 299 aa20.85■□□□□ 0.93
CDK9-201ENST00000373264 MS4A7Q9GZW8 240 aaPredicted RBP20.85■□□□□ 0.93
CDK9-201ENST00000373264 GPR173Q9NS66 373 aa20.85■□□□□ 0.93
CDK9-201ENST00000373264 DEPPQ9NTK1 212 aa20.85■□□□□ 0.93
CDK9-201ENST00000373264 IGKV1D-8A0A087WSZ0 117 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 HPNP05981 417 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 CYC1P08574 325 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 FKBP2P26885 142 aaKnown RBP20.84■□□□□ 0.93
CDK9-201ENST00000373264 BLVRBP30043 206 aaPredicted RBP20.84■□□□□ 0.93
CDK9-201ENST00000373264 GSK3AP49840 483 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 ARPC4P59998 168 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 RPS27AP62979 156 aaKnown RBP20.84■□□□□ 0.93
CDK9-201ENST00000373264 TUSC1Q2TAM9 212 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 SGK3Q96BR1 496 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 DHRS9Q9BPW9 319 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 HDHD3Q9BSH5 251 aaPredicted RBP20.84■□□□□ 0.93
CDK9-201ENST00000373264 PINLYPA6NC86 204 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 GSTP1P09211 210 aaKnown RBP20.84■□□□□ 0.93
CDK9-201ENST00000373264 B4GALT1P15291 398 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 CSNK2A1P68400 391 aaPredicted RBP20.84■□□□□ 0.93
CDK9-201ENST00000373264 ECH1Q13011 328 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 WIPI1Q5MNZ9 446 aaPredicted RBP20.84■□□□□ 0.93
CDK9-201ENST00000373264 FOXL2NBQ6ZUU3 175 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 GLRX5Q86SX6 157 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 SLC51BQ86UW2 128 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 ARMC10Q8N2F6 343 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 MBD2Q9UBB5 411 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 GPR160Q9UJ42 338 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 V9GYS6 101 aa20.84■□□□□ 0.93
CDK9-201ENST00000373264 ANGPTL7O43827 346 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 CXCL13O43927 109 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 ADAP1O75689 374 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 PRF1P14222 555 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 CALCRP30988 508 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 SERPINF1P36955 418 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 DLSTP36957 453 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 HIST1H3AP68431 136 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 SRSF4Q08170 494 aaKnown RBP20.83■□□□□ 0.93
CDK9-201ENST00000373264 HIST2H3PS2Q5TEC6 136 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 HIST2H3AQ71DI3 136 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 GGNQ86UU5 652 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 C20orf196Q8IYI0 205 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 STPG2Q8N412 459 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 OR56B1Q8NGI3 324 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 OR13G1Q8NGZ3 307 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 AKR7LQ8NHP1 331 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 PIGQQ9BRB3 760 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 NAA11Q9BSU3 229 aaPredicted RBP20.83■□□□□ 0.93
CDK9-201ENST00000373264 COMMD9Q9P000 198 aa20.83■□□□□ 0.93
CDK9-201ENST00000373264 C5orf51A6NDU8 294 aa20.83■□□□□ 0.92
CDK9-201ENST00000373264 TUBAL3A6NHL2 446 aa20.83■□□□□ 0.92
CDK9-201ENST00000373264 C19orf67A6NJJ6 358 aa20.83■□□□□ 0.92
CDK9-201ENST00000373264 SCGNO76038 276 aa20.83■□□□□ 0.92
CDK9-201ENST00000373264 TCN2P20062 427 aa20.83■□□□□ 0.92
CDK9-201ENST00000373264 OTX1P32242 354 aaPredicted RBP20.83■□□□□ 0.92
CDK9-201ENST00000373264 CLDN15P56746 228 aa20.83■□□□□ 0.92
CDK9-201ENST00000373264 C6orf201Q7Z4U5 140 aa20.83■□□□□ 0.92
CDK9-201ENST00000373264 FGFBP3Q8TAT2 258 aa20.83■□□□□ 0.92
CDK9-201ENST00000373264 NUDT16L1Q9BRJ7 211 aaKnown RBP20.83■□□□□ 0.92
CDK9-201ENST00000373264 YKT6O15498 198 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 TRAPPC6AO75865 159 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 CER1O95813 267 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 AMY2BP19961 511 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 RFC3P40938 356 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 TRA2AQ13595 282 aaKnown RBP eCLIP20.82■□□□□ 0.92
CDK9-201ENST00000373264 PEAR1Q5VY43 1037 aaPredicted RBP20.82■□□□□ 0.92
CDK9-201ENST00000373264 ANAPC10Q9UM13 185 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 LRRC3CA6NJW4 275 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 FOXI3A8MTJ6 420 aaPredicted RBP20.82■□□□□ 0.92
CDK9-201ENST00000373264 VAMP5O95183 116 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 NAT2P11245 290 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 GABRR1P24046 479 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 ZNF133P52736 654 aaPredicted RBP20.82■□□□□ 0.92
CDK9-201ENST00000373264 KCNRGQ8N5I3 272 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 GALNT11Q8NCW6 608 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 CHST5Q9GZS9 411 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 TCFL5Q9UL49 500 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 FLVCR1Q9Y5Y0 555 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 FREM1Q5H8C1 2179 aa20.82■□□□□ 0.92
CDK9-201ENST00000373264 A0A0U1RQV5 110 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 MSTNO14793 375 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 SPRY1O43609 319 aaPredicted RBP20.81■□□□□ 0.92
CDK9-201ENST00000373264 DUS4LO95620 317 aaKnown RBP20.81■□□□□ 0.92
CDK9-201ENST00000373264 IGHV3-9P01782 118 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 NAT1P18440 290 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 SNU13P55769 128 aaKnown RBP20.81■□□□□ 0.92
CDK9-201ENST00000373264 FAM89BQ8N5H3 189 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 ESX1Q8N693 406 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 BOLLQ8N9W6 283 aaKnown RBP20.81■□□□□ 0.92
CDK9-201ENST00000373264 PNLDC1Q8NA58 520 aaKnown RBP20.81■□□□□ 0.92
CDK9-201ENST00000373264 ZNF845Q96IR2 970 aaPredicted RBP20.81■□□□□ 0.92
CDK9-201ENST00000373264 URM1Q9BTM9 101 aaKnown RBP20.81■□□□□ 0.92
CDK9-201ENST00000373264 PECRQ9BY49 303 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 MCTS1Q9ULC4 181 aaKnown RBP20.81■□□□□ 0.92
CDK9-201ENST00000373264 GPR132Q9UNW8 380 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 ZNF205O95201 554 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 GLRA1P23415 457 aa20.81■□□□□ 0.92
CDK9-201ENST00000373264 DUSP3P51452 185 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms