RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SSX5O60225 188 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 EIF1BO60739 113 aaKnown RBP10.3□□□□□ -0.76
PDE6C-201ENST00000371447 GIPP09681 153 aaPredicted RBP10.3□□□□□ -0.76
PDE6C-201ENST00000371447 MGMTP16455 207 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 FOXG1P55316 489 aaPredicted RBP10.3□□□□□ -0.76
PDE6C-201ENST00000371447 ABHD17BQ5VST6 288 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 DTWD2Q8NBA8 298 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 OR6S1Q8NH40 331 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 CCDC107Q8WV48 283 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 PIGCQ92535 297 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 STRADBQ9C0K7 418 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 LGALS8O00214 317 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 CD63P08962 238 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 ACKR3P25106 362 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 ARHGDIBP52566 201 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 TMEM50BP56557 158 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 HGFACQ04756 655 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 MICBQ29980 383 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 DOK3Q7L591 496 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 TMPRSS7Q7RTY8 843 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 TMEM229BQ8NBD8 167 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 C12orf49Q9H741 205 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 ZC4H2Q9NQZ6 224 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 IGLV3-32A0A0A0MS00 114 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 YKT6O15498 198 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 ADH6P28332 368 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 PTGFRP43088 359 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 H3F3AP84243 136 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 GK2Q14410 553 aaPredicted RBP10.3□□□□□ -0.76
PDE6C-201ENST00000371447 IGFBP7Q16270 282 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 RSPO1Q2MKA7 263 aaPredicted RBP10.3□□□□□ -0.76
PDE6C-201ENST00000371447 TMUB2Q71RG4 321 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 HDDC2Q7Z4H3 204 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 FAM109AQ8N4B1 249 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 FNDC9Q8TBE3 224 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 CXorf58Q96LI9 332 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 COMMD9Q9P000 198 aa10.3□□□□□ -0.76
PDE6C-201ENST00000371447 A0A1W2PNU3 283 aaPredicted RBP10.29□□□□□ -0.76
PDE6C-201ENST00000371447 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 SNRPGP15A8MWD9 76 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 LDLRAD4O15165 306 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 ADAP1O75689 374 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 PMS2P2O95744 297 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 HLA-HP01893 362 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 CSTBP04080 98 aaKnown RBP10.29□□□□□ -0.76
PDE6C-201ENST00000371447 MAGEA5P43359 124 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 ATP1B3P54709 279 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 RAB12Q6IQ22 244 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 UNQ6126/PRO20091Q6UXV3 157 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 OR14K1Q8NGZ2 314 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 KCNG3Q8TAE7 436 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 OR10A2Q9H208 303 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 PLEKHJ1Q9NW61 149 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 EHFQ9NZC4 300 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 PCDHGA1Q9Y5H4 931 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 FLVCR1Q9Y5Y0 555 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 PLSCR5A0PG75 271 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 BPNT1O95861 308 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 IL5P05113 134 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 ZNF735P0CB33 412 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 GRB2P62993 217 aaKnown RBP10.29□□□□□ -0.76
PDE6C-201ENST00000371447 TOR2AQ5JU69 321 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 ZNF600Q6ZNG1 722 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 TMEM17Q86X19 198 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 AQP3Q92482 292 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 TOMM40LQ969M1 308 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 SPTSSAQ969W0 71 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 SGK3Q96BR1 496 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 SGCZQ96LD1 299 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 AIFM2Q9BRQ8 373 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 DEFB127Q9H1M4 99 aa10.29□□□□□ -0.76
PDE6C-201ENST00000371447 TNFSF15O95150 251 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 HOXB5P09067 269 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 CD79AP11912 226 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 S100A11P31949 105 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 TRA2AQ13595 282 aaKnown RBP eCLIP10.28□□□□□ -0.76
PDE6C-201ENST00000371447 HLXQ14774 488 aaPredicted RBP10.28□□□□□ -0.76
PDE6C-201ENST00000371447 TMEM164Q5U3C3 297 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 C5orf24Q7Z6I8 188 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 PPP1R1CQ8WVI7 109 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 REEP6Q96HR9 211 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 FAAP24Q9BTP7 215 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 ZNF629Q9UEG4 869 aaPredicted RBP10.28□□□□□ -0.76
PDE6C-201ENST00000371447 A0A1W2PR80 420 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 OR5H14A6NHG9 310 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 LRRC3CA6NJW4 275 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 NUPL2O15504 423 aaKnown RBP10.28□□□□□ -0.76
PDE6C-201ENST00000371447 RP2O75695 350 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 SERPINA5P05154 406 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 HIST1H1DP16402 221 aaKnown RBP10.28□□□□□ -0.76
PDE6C-201ENST00000371447 GLRA1P23415 457 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 FXYD4P59646 89 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 SEZ6L2Q6UXD5 910 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 OR5H2Q8NGV7 314 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 FBXW5Q969U6 566 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 NABP1Q96AH0 204 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 URM1Q9BTM9 101 aaKnown RBP10.28□□□□□ -0.76
PDE6C-201ENST00000371447 ZNF471Q9BX82 626 aaPredicted RBP10.28□□□□□ -0.76
PDE6C-201ENST00000371447 SLC17A5Q9NRA2 495 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 MPTX1A8MV57 137 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms