RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ZNF610Q8N9Z0 462 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 CD300LFQ8TDQ1 290 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 PRRX2Q99811 253 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 SRMSQ9H3Y6 488 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 OR52A1Q9UKL2 312 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 URGCP-MRPS24S4R325 110 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 A6NCN8 305 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 H3BQ15 152 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 K7EPK0 472 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 CLDN4O14493 209 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 GMFGO60234 142 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 FABP4P15090 132 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 OR3A4PP47883 348 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 NUTF2P61970 127 aaKnown RBP10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 OR8G1Q15617 311 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 SLC18B1Q6NT16 456 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 OR5AS1Q8N127 324 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 FAM71E2Q8N5Q1 922 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 C10orf53Q8N6V4 93 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 DNASE2BQ8WZ79 361 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 RSC1A1Q92681 617 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 ARHGAP5-AS1Q96IT6 56 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 NUDT16L1Q9BRJ7 211 aaKnown RBP10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 METTL8Q9H825 291 aaKnown RBP10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 CKLFQ9UBR5 152 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 HSF4Q9ULV5 492 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 CCDC187A0A096LP49 1063 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 TMEM269A0A1B0GVZ9 245 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 GPR89AB7ZAQ6 455 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 E9PLN8 166 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 BPNT1O95861 308 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 SEC11BP0C7V7 166 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 GPR89BP0CG08 455 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 NHLH2Q02577 135 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 ZNF385CQ66K41 422 aaPredicted RBP10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 LRRC18Q8N456 261 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 SLC25A31Q9H0C2 315 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 BANF2Q9H503 90 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 ZNF319Q9P2F9 582 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 HHLA2Q9UM44 414 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 VPS13AQ96RL7 3174 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 OR5H15A6NDH6 313 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 OR5H1A6NKK0 313 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 POM121Q96HA1 1249 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 C11orf1Q9H5F2 150 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 FAM60AQ9NP50 221 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 PPP4R1LQ9P1A2 415 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 FOXD3Q9UJU5 478 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 COA3Q9Y2R0 106 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 HLA-DQA2P01906 255 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 HIST1H1DP16402 221 aaKnown RBP10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 ASCL1P50553 236 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 IAH1Q2TAA2 248 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 FIGLAQ6QHK4 219 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 C1QL2Q7Z5L3 287 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 NKAIN3Q8N8D7 197 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 OR9A4Q8NGU2 314 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 THAP10Q9P2Z0 257 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 SRPK3Q9UPE1 567 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 TMED3Q9Y3Q3 217 aa10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 COL5A1P20908 1838 aaPredicted RBP10.28□□□□□ -0.76
SMARCA1-201ENST00000371121 C9J4A7 227 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 H0YIG0 161 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 ADAM10O14672 748 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 RENP00797 406 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 HCKP08631 526 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 OR5H8P0DN80 308 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 NUBP1P53384 320 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 SUCLG1P53597 346 aaKnown RBP10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 HSF1Q00613 529 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 TMEM176BQ3YBM2 270 aaPredicted RBP10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 TAF8Q7Z7C8 310 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 SHDQ96IW2 340 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 SSX3Q99909 188 aa10.27□□□□□ -0.76
SMARCA1-201ENST00000371121 C5orf63A6NC05 138 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 IFNL4K9M1U5 179 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 CDC14BO60729 498 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 IFNA6P05013 189 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 HSD11B1P28845 292 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 P2RY1P47900 373 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 RND3P61587 244 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 PDGFRLQ15198 375 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 DCXRQ7Z4W1 244 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 KDM8Q8N371 416 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 S100PBPQ96BU1 408 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 RCC1LQ96I51 464 aaKnown RBP10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 S1PR5Q9H228 398 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNF581Q9P0T4 197 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 WASF3Q9UPY6 502 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 NPIPB7O75200 414 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 SRP19P09132 144 aaKnown RBP10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 QDPRP09417 244 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 PNMTP11086 282 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 SERPINA2P20848 420 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 GJA4P35212 333 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 DNASE1L1P49184 302 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 NOVA1P51513 510 aaKnown RBP10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 GGNBP1Q5YKI7 109 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 PLXDC2Q6UX71 529 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms