RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 OR51V1Q9H2C8 321 aa13.35□□□□□ -0.27
VMA21-202ENST00000370361 DPAGT1Q9H3H5 408 aa13.35□□□□□ -0.27
VMA21-202ENST00000370361 FAM181BA6NEQ2 426 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 NKX6-3A6NJ46 265 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 E2F6O75461 281 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 MELTFP08582 738 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 DCTDP32321 178 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 RAG2P55895 527 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 GINS1Q14691 196 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 FAM76BQ5HYJ3 339 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 KCTD18Q6PI47 426 aaPredicted RBP13.34□□□□□ -0.27
VMA21-202ENST00000370361 C17orf107Q6ZR85 190 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 C1orf122Q6ZSJ8 110 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 KRT74Q7RTS7 529 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 HS3ST5Q8IZT8 346 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 SCCPDHQ8NBX0 429 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 LY6G5BQ8NDX9 201 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 THEM6Q8WUY1 208 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 MED30Q96HR3 178 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 HIST1H2AAQ96QV6 131 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 PRRG3Q9BZD7 231 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 DNAJC27Q9NZQ0 273 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 DNAJB11Q9UBS4 358 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 RHBDD3Q9Y3P4 386 aa13.34□□□□□ -0.27
VMA21-202ENST00000370361 A0A0U1RQV5 110 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 MDFIC2A0A1B0GVS7 189 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 PRKACGP22612 351 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 ANOS1P23352 680 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 POU1F1P28069 291 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 CDK5Q00535 292 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 GFOD2Q3B7J2 385 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 KLHL12Q53G59 568 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 WDR38Q5JTN6 314 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 STUMQ69YW2 141 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 PLBD1Q6P4A8 553 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 FIP1L1Q6UN15 594 aaKnown RBP13.33□□□□□ -0.28
VMA21-202ENST00000370361 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 GDPGP1Q6ZNW5 385 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 WDR86Q86TI4 376 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 IQCF1Q8N6M8 205 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 C8orf46Q8TAG6 207 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 OR5P3Q8WZ94 311 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 UTP4Q969X6 686 aaKnown RBP13.33□□□□□ -0.28
VMA21-202ENST00000370361 CHIAQ9BZP6 476 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 YIPF3Q9GZM5 350 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 MED20Q9H944 212 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 HAO2Q9NYQ3 351 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 LAMP5Q9UJQ1 280 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 TMEM14AQ9Y6G1 99 aa13.33□□□□□ -0.28
VMA21-202ENST00000370361 CLPSL1A2RUU4 121 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 BTBD17A6NE02 478 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.32□□□□□ -0.28
VMA21-202ENST00000370361 CDIPTO14735 213 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 ZNF254O75437 659 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 MDKP21741 143 aaPredicted RBP13.32□□□□□ -0.28
VMA21-202ENST00000370361 EEF1B2P24534 225 aaKnown RBP13.32□□□□□ -0.28
VMA21-202ENST00000370361 MAP2K3P46734 347 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 TGM4P49221 684 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 ARF6P62330 175 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 PRDX4Q13162 271 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 ZBTB37Q5TC79 503 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 LCN1P1Q5VSP4 162 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 RUSC1-AS1Q66K80 236 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 OLFML2AQ68BL7 652 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 ZDHHC23Q8IYP9 409 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 FAM81AQ8TBF8 368 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 WFDC12Q8WWY7 111 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 ASB17Q8WXJ9 295 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 LHX4Q969G2 390 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 NRBF2Q96F24 287 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 RAB3IPQ96QF0 476 aaPredicted RBP13.32□□□□□ -0.28
VMA21-202ENST00000370361 AMELYQ99218 206 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 PKP2Q99959 881 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 MROQ9BYG7 248 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 SLC25A19Q9HC21 320 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 FAM96BQ9Y3D0 163 aa13.32□□□□□ -0.28
VMA21-202ENST00000370361 IGHV3OR15-7A0A075B7D8 119 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 ZNF816-ZNF321PA0A0X1KG74 233 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 OR5B21A6NL26 309 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 M0R1W7 72 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 FBP1P09467 338 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 ALOX5APP20292 161 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 CAV3P56539 151 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 GNG3P63215 75 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 CSNK2BP67870 215 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 NCR3LG1Q68D85 454 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 VMO1Q7Z5L0 202 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 KRT77Q7Z794 578 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 CPOQ8IVL8 374 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 DUS3LQ96G46 650 aaKnown RBP13.31□□□□□ -0.28
VMA21-202ENST00000370361 CCL13Q99616 98 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 DCTN5Q9BTE1 182 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 RASSF4Q9H2L5 321 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 BRD7Q9NPI1 651 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 C1RLQ9NZP8 487 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 ZNF319Q9P2F9 582 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 ONECUT1Q9UBC0 465 aa13.31□□□□□ -0.28
VMA21-202ENST00000370361 SOX21Q9Y651 276 aaPredicted RBP13.31□□□□□ -0.28
VMA21-202ENST00000370361 ZNF850A8MQ14 1090 aa13.3□□□□□ -0.28
VMA21-202ENST00000370361 TIMM23O14925 209 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms