RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 PMF1-BGLAPU3KQ54 211 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 HCFC1P51610 2035 aa10.56□□□□□ -0.72
TUBE1-202ENST00000368662 IGKV1-9A0A0C4DH69 117 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 SLC17A2O00624 439 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 ZNF93P35789 620 aaPredicted RBP10.55□□□□□ -0.72
TUBE1-202ENST00000368662 MPV17P39210 176 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 FABP6P51161 128 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 FUT6P51993 359 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 SCAND1P57086 179 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 KLF3P57682 345 aaPredicted RBP10.55□□□□□ -0.72
TUBE1-202ENST00000368662 PRDX4Q13162 271 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 MOGQ16653 247 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 PLCXD3Q63HM9 321 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 LHFPL2Q6ZUX7 228 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 OR5AS1Q8N127 324 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 JAGN1Q8N5M9 183 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 PNLDC1Q8NA58 520 aaKnown RBP10.55□□□□□ -0.72
TUBE1-202ENST00000368662 BHLHE23Q8NDY6 225 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 OR52N4Q8NGI2 321 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 OR6M1Q8NGM8 313 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 TMEM171Q8WVE6 324 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 GPR173Q9NS66 373 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 CA10Q9NS85 328 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 ABRACLQ9P1F3 81 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 NOP16Q9Y3C1 178 aaKnown RBP10.55□□□□□ -0.72
TUBE1-202ENST00000368662 KLF2Q9Y5W3 355 aaPredicted RBP10.55□□□□□ -0.72
TUBE1-202ENST00000368662 USP9XQ93008 2570 aaPredicted RBP10.55□□□□□ -0.72
TUBE1-202ENST00000368662 IGLV3-9A0A075B6K5 115 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 ZNF850A8MQ14 1090 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 TIMM8AO60220 97 aaPredicted RBP10.55□□□□□ -0.72
TUBE1-202ENST00000368662 IGHV3-13P01766 116 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 HTR2CP28335 458 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 S100A5P33763 92 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 RBP2P50120 134 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 RIN1Q13671 783 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 C1orf100Q5SVJ3 147 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 MOB3CQ70IA8 216 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 OR8G5Q8NG78 346 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 FAM222BQ8WU58 562 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 BORCS8Q96FH0 119 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 CGGBP1Q9UFW8 167 aaPredicted RBP10.55□□□□□ -0.72
TUBE1-202ENST00000368662 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 PEX16Q9Y5Y5 336 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 ATP23Q9Y6H3 246 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 PLCE1Q9P212 2302 aa10.55□□□□□ -0.72
TUBE1-202ENST00000368662 CALCBP10092 127 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 IGFBP2P18065 325 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 KISS1Q15726 138 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 RAB11BQ15907 218 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 CEACAM21Q3KPI0 293 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 ADAM5Q6NVV9 412 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 LYPD6Q86Y78 171 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 OR5A2Q8NGI9 324 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 ZNF671Q8TAW3 534 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 SSC4DQ8WTU2 575 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 TSC22D3Q99576 134 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 TMEM100Q9NV29 134 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 CRIM1Q9NZV1 1036 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 GPR160Q9UJ42 338 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 BMXP51813 675 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 ATP1B3P54709 279 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 MTCP1P56278 107 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 HES5Q5TA89 166 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 FAM166AQ6J272 317 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 VHLLQ6RSH7 139 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 SPERTQ8NA61 448 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 MRPL24Q96A35 216 aaKnown RBP10.54□□□□□ -0.72
TUBE1-202ENST00000368662 GPER1Q99527 375 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 LIN7BQ9HAP6 207 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 SMURF1Q9HCE7 757 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 DUSP13Q9UII6 198 aa10.54□□□□□ -0.72
TUBE1-202ENST00000368662 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.53□□□□□ -0.72
TUBE1-202ENST00000368662 OR5B21A6NL26 309 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 SHISA9B4DS77 424 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 RGS5O15539 181 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 SLC2A2P11168 524 aaPredicted RBP10.53□□□□□ -0.72
TUBE1-202ENST00000368662 CA6P23280 308 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 THBS2P35442 1172 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 DMRTC2Q8IXT2 367 aaPredicted RBP10.53□□□□□ -0.72
TUBE1-202ENST00000368662 OR13G1Q8NGZ3 307 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 NPRL2Q8WTW4 380 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 CMTM3Q96MX0 182 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 MICU1Q9BPX6 476 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 CNTD2Q9H8S5 307 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 CYSLTR2Q9NS75 346 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 FZR1Q9UM11 496 aa10.53□□□□□ -0.72
TUBE1-202ENST00000368662 FAM230AA0A1W2PPH8 454 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 PLSCR5A0PG75 271 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 DEFB108AA8MXU0 73 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 GOSR1O95249 250 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 UBBP0CG47 229 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 ARSBP15848 533 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 EVX1P49640 407 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 MZT1Q08AG7 82 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 OR6Q1Q8NGQ2 317 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 OR8S1Q8NH09 359 aa10.52□□□□□ -0.72
TUBE1-202ENST00000368662 TRMT10AQ8TBZ6 339 aaKnown RBP10.52□□□□□ -0.72
TUBE1-202ENST00000368662 OR5P3Q8WZ94 311 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms