RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 NCOA6Q14686 2063 aaPredicted RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 SLC22A20A6NK97 555 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 RPL36A-HNRNPH2H7BZ11 118 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 K7EM74 188 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 CDC14BO60729 498 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 PNPP00491 289 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 CD2P06729 351 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 SRMP19623 302 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 ACHEP22303 614 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 PCBD1P61457 104 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 TAF13Q15543 124 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 TMEM244Q5VVB8 128 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 SFXN4Q6P4A7 337 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 ABHD12BQ7Z5M8 362 aaPredicted RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 CCDC190Q86UF4 302 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 TUSC5Q8IXB3 177 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 TSEN15Q8WW01 171 aaKnown RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 SLC30A2Q9BRI3 323 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 PNRC2Q9NPJ4 139 aaKnown RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 FAM206AQ9NX38 181 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 FBXL3Q9UKT7 428 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 TRBV5-7A0A0A0MS05 114 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 A0A1B0GTH9 108 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 ACOD1A6NK06 481 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 ZNF587BE7ETH6 402 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 RER1O15258 196 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 FARS2O95363 451 aaKnown RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 CRYABP02511 175 aaKnown RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 APOC1P02654 83 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 HIST1H3AP68431 136 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 NHLH2Q02577 135 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 RBPJQ06330 500 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 SCRN3Q0VDG4 424 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 C3AR1Q16581 482 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 CEACAM16Q2WEN9 425 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 HIST2H3PS2Q5TEC6 136 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 HIST2H3AQ71DI3 136 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 P4HA3Q7Z4N8 544 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 SIAH3Q8IW03 269 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 RBMXL3Q8N7X1 1067 aaKnown RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 ACBD4Q8NC06 268 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 ITLN2Q8WWU7 325 aaPredicted RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 TMEM106AQ96A25 262 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 APH1AQ96BI3 265 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 HDHD2Q9H0R4 259 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 ASF1BQ9NVP2 202 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 CLCF1Q9UBD9 225 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 NUFIP1Q9UHK0 495 aaKnown RBP7.6□□□□□ -1.19
TPM3-213ENST00000368545 HHLA2Q9UM44 414 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 DHDHQ9UQ10 334 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 SLC22A13Q9Y226 551 aa7.6□□□□□ -1.19
TPM3-213ENST00000368545 FLNCQ14315 2725 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 LOC107986453A0A1B0GWG9 222 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 SMIM30A4D0T7 59 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 NPIPB5A8MRT5 1133 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 CTDSP2O14595 271 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 SLC19A2O60779 497 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 NCR1O76036 304 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 PSMD7P51665 324 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 CAV3P56539 151 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 ECH1Q13011 328 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 ELFN2Q5R3F8 820 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 IDNKQ5T6J7 187 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 TSPO2Q5TGU0 170 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 NR2C2APQ86WQ0 139 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 LAX1Q8IWV1 398 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 ELMOD2Q8IZ81 293 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 LRRC18Q8N456 261 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 SLC22A24Q8N4F4 322 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 GMPPAQ96IJ6 420 aaPredicted RBP7.59□□□□□ -1.19
TPM3-213ENST00000368545 ZCCHC4Q9H5U6 513 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 CALHM2Q9HA72 323 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 UPB1Q9UBR1 384 aa7.59□□□□□ -1.19
TPM3-213ENST00000368545 A0A0G2JK05 382 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 FAM181BA6NEQ2 426 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 J3QRK9 145 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 PIN1P1O15428 100 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 TRIAP1O43715 76 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 SS18L1O75177 396 aaPredicted RBP7.58□□□□□ -1.2
TPM3-213ENST00000368545 HEXAP06865 529 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 AGTR1P30556 359 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 TNFSF8P32971 234 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 SOX2P48431 317 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 CX3CR1P49238 355 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 TLE4Q04727 773 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 HLXQ14774 488 aaPredicted RBP7.58□□□□□ -1.2
TPM3-213ENST00000368545 RAB35Q15286 201 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 SF3B4Q15427 424 aaKnown RBP eCLIP7.58□□□□□ -1.21e-13■■□□□ 12.6
TPM3-213ENST00000368545 ODF4Q2M2E3 257 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 ACSM6Q6P461 480 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 ZNF627Q7L945 461 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 LINGO2Q7L985 606 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 PARP16Q8N5Y8 322 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 OR51A4Q8NGJ6 313 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 SPTSSAQ969W0 71 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 DPCDQ9BVM2 203 aaPredicted RBP7.58□□□□□ -1.2
TPM3-213ENST00000368545 PBOV1Q9GZY1 135 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 SAP30LQ9HAJ7 183 aa7.58□□□□□ -1.2
TPM3-213ENST00000368545 ABCB9Q9NP78 766 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms