RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TRAV38-1A0A0B4J264 116 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 KIR2DS1A0A191URI9 304 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 hCG_1807616A0A1W2PRN6 198 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 C22orf46C9J442 243 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 ZNF670-ZNF695F2Z2N8 137 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 CDIPTO14735 213 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 MAP2K3P46734 347 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 ALDH3A2P51648 485 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 PLEKHG7Q6ZR37 379 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 USP43Q70EL4 1123 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 LRRC29Q8WV35 223 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 ITFG2Q969R8 447 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 RTL8AQ9BWD3 113 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 S100A14Q9HCY8 104 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 ABCB9Q9NP78 766 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 TRIM36Q9NQ86 728 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 R4GMQ9 66 aa15.76■□□□□ 0.11
CKS1B-203ENST00000368439 ZNF816-ZNF321PA0A0X1KG74 233 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 TMEM210A6NLX4 147 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 ANXA2P2A6NMY6 339 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 SRRM5B3KS81 715 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 NDUFA2O43678 99 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 APOL3O95236 402 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 GYPAP02724 150 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 ATP6V1B1P15313 513 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 HILS1P60008 231 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 CDC42P60953 191 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 TMED1Q13445 227 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 KCNJ8Q15842 424 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 Q6ZSR3 168 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 ZDHHC23Q8IYP9 409 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 CBR4Q8N4T8 237 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 TRUB1Q8WWH5 349 aaKnown RBP15.75■□□□□ 0.11
CKS1B-203ENST00000368439 TBX5Q99593 518 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 SLC6A7Q99884 636 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 MRI1Q9BV20 369 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 SMURF1Q9HCE7 757 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 KAAG1Q9UBP8 84 aa15.75■□□□□ 0.11
CKS1B-203ENST00000368439 IGHV3OR15-7A0A075B7D8 119 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 A0A1B0GTI1 187 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 A0A1W2PQL4 384 aaPredicted RBP15.74■□□□□ 0.11
CKS1B-203ENST00000368439 ADAM20O43506 726 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 RGS9O75916 674 aaPredicted RBP15.74■□□□□ 0.11
CKS1B-203ENST00000368439 OR2T7P0C7T2 308 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 PPIAL4GP0DN37 164 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 NPY4RP50391 375 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 ELF3P78545 371 aaPredicted RBP15.74■□□□□ 0.11
CKS1B-203ENST00000368439 POU4F2Q12837 409 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 ZIK1Q3SY52 487 aaPredicted RBP15.74■□□□□ 0.11
CKS1B-203ENST00000368439 SLC25A30Q5SVS4 291 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 ELMOD2Q8IZ81 293 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 SCCPDHQ8NBX0 429 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 OR10Z1Q8NGY1 313 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 OR2T27Q8NH04 317 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 FAM81AQ8TBF8 368 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 ZNF418Q8TF45 676 aaPredicted RBP15.74■□□□□ 0.11
CKS1B-203ENST00000368439 RPL3LQ92901 407 aaKnown RBP15.74■□□□□ 0.11
CKS1B-203ENST00000368439 SEH1LQ96EE3 360 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 RNF170Q96K19 258 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 FAM71F1Q96KD3 344 aaPredicted RBP15.74■□□□□ 0.11
CKS1B-203ENST00000368439 MBOAT4Q96T53 435 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 SLC29A1Q99808 456 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 NUDT16L1Q9BRJ7 211 aaKnown RBP15.74■□□□□ 0.11
CKS1B-203ENST00000368439 MOB1AQ9H8S9 216 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 OR52A1Q9UKL2 312 aa15.74■□□□□ 0.11
CKS1B-203ENST00000368439 A0A1B0GW55 424 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 LOC110117498-PIK3R3F6TDL0 507 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DHRS3O75911 302 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DUX4L2P0CJ85 424 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DUX4L3P0CJ86 424 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DUX4L4P0CJ87 422 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DUX4L5P0CJ88 424 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DUX4L6P0CJ89 424 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DUX4L7P0CJ90 424 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 MUC1P15941 1255 aaPredicted RBP15.73■□□□□ 0.11
CKS1B-203ENST00000368439 AMY2BP19961 511 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 RIPPLY1Q0D2K3 151 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 ARMCX4Q5H9R4 360 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 ZBTB37Q5TC79 503 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DUX4L9Q6RFH8 374 aaPredicted RBP15.73■□□□□ 0.11
CKS1B-203ENST00000368439 BTNL3Q6UXE8 466 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 C10orf67Q8IYJ2 551 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 C22orf15Q8WYQ4 148 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 UPRTQ96BW1 309 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 RASSF4Q9H2L5 321 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 ERVK-18Q9QC07 812 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 DUX4Q9UBX2 424 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 ZNF69Q9UC07 566 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 NUP50Q9UKX7 468 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 SNX5Q9Y5X3 404 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 V9GYS6 101 aa15.73■□□□□ 0.11
CKS1B-203ENST00000368439 J3QRE1 110 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 ENTPD6O75354 484 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 FAHP16930 419 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 ISL1P61371 349 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 SNRPGP62308 76 aaKnown RBP15.72■□□□□ 0.11
CKS1B-203ENST00000368439 ZNF85Q03923 595 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 OCLNQ16625 522 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 CEACAM21Q3KPI0 293 aa15.72■□□□□ 0.11
CKS1B-203ENST00000368439 DMRTC1Q5HYR2 192 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms