RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SELENOPP49908 381 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM240Q5SV17 173 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 PRR18Q8N4B5 295 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 FBXW5Q969U6 566 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 ARV1Q9H2C2 271 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 SNCAP37840 140 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 CD96P40200 585 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 LSRQ86X29 649 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR2AE1Q8NHA4 323 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 OBP2BQ9NPH6 170 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 CBX7O95931 251 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 RRADP55042 308 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM215Q68D42 235 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 CORO6Q6QEF8 472 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR4A16Q8NH70 328 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 SLCO1B1Q9Y6L6 691 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 CADP27708 2225 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 ARGFXA6NJG6 315 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 GPR31O00270 319 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 DEGS1O15121 323 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 SLC25A4P12235 298 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF92Q03936 586 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 PTP4A1Q93096 173 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMPRSS5Q9H3S3 457 aa10.59□□□□□ -0.71
CDC42BPA-202ENST00000366764 DHRS3O75911 302 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 APH1AQ96BI3 265 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF768Q9H5H4 540 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 PCOLCE2Q9UKZ9 415 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZFP92A6NM28 416 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 IGF2P01344 180 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 CSNK1EP49674 416 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 PRAMEF20Q5VT98 475 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 CDC20BQ86Y33 519 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 C6orf106Q9H6K1 298 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 A0A1W2PPC4 97 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 SLC2A1P11166 492 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 GPBAR1Q8TDU6 330 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 EMC6Q9BV81 110 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 A0A1W2PQD3 144 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 SFT2D2O95562 160 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 CRHP06850 196 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 RANP62826 216 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 STK11Q15831 433 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 CPEB2Q7Z5Q1 589 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR4N2Q8NGD1 307 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 ICAM5Q9UMF0 924 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 YBX1P67809 324 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 RAB35Q15286 201 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 CATSPERDQ86XM0 798 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 Q8IYB0 196 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 SUMF1Q8NBK3 374 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR4C3Q8NH37 302 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 MITD1Q8WV92 249 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF251Q9BRH9 671 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 CES1P1Q9UKY3 287 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 FUT3P21217 361 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 ABCD3P28288 659 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 FAM199XQ6PEV8 388 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR4S1Q8NGB4 309 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 TSPAN32Q96QS1 320 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 ACTR3CQ9C0K3 210 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 RAB5AP20339 215 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 RNF4P78317 190 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 HTRA4P83105 476 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 LAIR2Q6ISS4 152 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 REEP6Q96HR9 211 aa10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 GPX7Q96SL4 187 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-202ENST00000366764 GLB1P16278 677 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 PTGER4P35408 488 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 BAXQ07812 192 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 RTL8AQ9BWD3 113 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 UCK1Q9HA47 277 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 OPN1LWP04000 364 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 FOSL1P15407 271 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 GUCA2AQ02747 115 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 IL13RA2Q14627 380 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 RAB40CQ96S21 281 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 ST3GAL6Q9Y274 331 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 CCDC85CA6NKD9 419 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 SDCBPO00560 298 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF117Q03924 483 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 MYBPHQ13203 477 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 TMEM182Q6ZP80 229 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 PCDHGA9Q9Y5G4 932 aaKnown RBP10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 FOSL2P15408 326 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 EN2P19622 333 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 AVPR2P30518 371 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 CD81P60033 236 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF610Q8N9Z0 462 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 FN3KRPQ9HA64 309 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 NTMQ9P121 344 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF727A8MUV8 499 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 PTGFRP43088 359 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR1D5P58170 312 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 TBC1D28Q2M2D7 210 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 FAM209AQ5JX71 171 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms