RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 A0A1W2PRV1 198 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 HSPB2A8KAH6 182 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 SSSCA1O60232 199 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 IFNA10P01566 189 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 IFNA4P05014 189 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 ADIRFQ15847 76 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 HSPB2Q16082 182 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 AAED1Q7RTV5 226 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 OR51F2Q8NH61 342 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 LILRB1Q8NHL6 650 aaPredicted RBP12.41□□□□□ -0.42
COL6A1-201ENST00000361866 LIN37Q96GY3 246 aaPredicted RBP12.41□□□□□ -0.42
COL6A1-201ENST00000361866 ESPL1Q14674 2120 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 CACNA1GO43497 2377 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 SIP14410 1827 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 DICER1Q9UPY3 1922 aaKnown RBP12.41□□□□□ -0.42
COL6A1-201ENST00000361866 ELLP55199 621 aaPredicted RBP12.41□□□□□ -0.42
COL6A1-201ENST00000361866 ZNF239Q16600 458 aaKnown RBP12.41□□□□□ -0.42
COL6A1-201ENST00000361866 RTL6Q6ICC9 239 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 OVCH2Q7RTZ1 564 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 LIPHQ8WWY8 451 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 MRPS24Q96EL2 167 aaKnown RBP12.41□□□□□ -0.42
COL6A1-201ENST00000361866 REEP6Q96HR9 211 aa12.41□□□□□ -0.42
COL6A1-201ENST00000361866 NPDC1Q9NQX5 325 aaPredicted RBP12.41□□□□□ -0.42
COL6A1-201ENST00000361866 TIMM8BQ9Y5J9 83 aaPredicted RBP12.41□□□□□ -0.42
COL6A1-201ENST00000361866 A0A1W2PP11 408 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 KLF4O43474 513 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 OR2J2O76002 312 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 S100A8P05109 93 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 TBPP20226 339 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 PNLIPRP2P54317 469 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 RAB4BP61018 213 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 NCMAPQ5T1S8 102 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 AADACL3Q5VUY0 350 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 PPP1R3BQ86XI6 285 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 MRPL41Q8IXM3 137 aaKnown RBP12.4□□□□□ -0.42
COL6A1-201ENST00000361866 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 PIGQQ9BRB3 760 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 TNFSF18Q9UNG2 199 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 CENPFP49454 3210 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 LMX1BO60663 402 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 UPK3AO75631 287 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 NECAP1Q8NC96 275 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 HPSE2Q8WWQ2 592 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 EDAQ92838 391 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 LRRC61Q9BV99 259 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 FOXQ1Q9C009 403 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 TLNRD1Q9H1K6 362 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 FREM3P0C091 2139 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 CEBPZOSA8MTT3 80 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 LAMTOR5O43504 91 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 SYNGR4O95473 234 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 GABRG2P18507 467 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 TMEM33P57088 247 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 SLC35A1P78382 337 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 KISS1Q15726 138 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 THEM4Q5T1C6 240 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 ASB13Q8WXK3 278 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 PSMF1Q92530 271 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 PLK3Q9H4B4 646 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 PIPOXQ9P0Z9 390 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 KLK13Q9UKR3 277 aa12.4□□□□□ -0.42
COL6A1-201ENST00000361866 APC2O95996 2303 aa12.4□□□□□ -0.43
COL6A1-201ENST00000361866 E5RGE8 158 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 HLA-HP01893 362 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 RCC1P18754 421 aaPredicted RBP12.39□□□□□ -0.43
COL6A1-201ENST00000361866 DUSP1P28562 367 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 EIF2S3P41091 472 aaKnown RBP12.39□□□□□ -0.43
COL6A1-201ENST00000361866 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 GLRX5Q86SX6 157 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 ELSPBP1Q96BH3 223 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 PILRAQ9UKJ1 303 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 NSG2Q9Y328 171 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 NUDT19A8MXV4 375 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 TRAPPC2LH3BP13 241 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 ADAM11O75078 769 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 SCAF4O95104 1147 aaKnown RBP12.39□□□□□ -0.43
COL6A1-201ENST00000361866 SFT2D2O95562 160 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 RNF4P78317 190 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 MGAT2Q10469 447 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 MYBPHQ13203 477 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 RALGAPA2Q2PPJ7 1873 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 MSR1P21757 451 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 MSX1P28360 303 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 NPBWR1P48145 328 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 RBP2P50120 134 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 GRB2P62993 217 aaKnown RBP12.39□□□□□ -0.43
COL6A1-201ENST00000361866 TLE4Q04727 773 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 OR8G2PQ6IF36 304 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 PRSS54Q6PEW0 395 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 IL34Q6ZMJ4 242 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 OR2AE1Q8NHA4 323 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 RAB33BQ9H082 229 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 ABI3Q9P2A4 366 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 NCOR1O75376 2440 aa12.39□□□□□ -0.43
COL6A1-201ENST00000361866 A0A1W2PPH5 198 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 VSIG8P0DPA2 414 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 SPINK2P20155 84 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 GPR3P46089 330 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms