RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 APOBEC4Q8WW27 367 aaKnown RBP14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 OR2A5Q96R48 311 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 OR51I2Q9H344 312 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 TRBV11-1A0A0K0K1C0 115 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 HSD17B6O14756 317 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 RCC1P18754 421 aaPredicted RBP14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 BCKDHBP21953 392 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 GGTLC2Q14390 218 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 CA5BP1Q8WTZ4 195 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 ADAM19Q9H013 955 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 LINC01553A4QN01 128 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF121P58317 390 aaPredicted RBP14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 FMODQ06828 376 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 C2orf68Q2NKX9 166 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 PDLIM3Q53GG5 364 aaPredicted RBP14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 DBX2Q6ZNG2 339 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 IL22RA1Q8N6P7 574 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 C11orf40Q8WZ69 217 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 ARV1Q9H2C2 271 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 PLEKHF2Q9H8W4 249 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 CES1P1Q9UKY3 287 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 MRPS2Q9Y399 296 aaKnown RBP14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 MT-CO2P00403 227 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 DHODHQ02127 395 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 CBLN3Q6UW01 205 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 UNQ9370/PRO34162Q6UXP9 181 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 OR51F2Q8NH61 342 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 ASB5Q8WWX0 329 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 GSN-AS1Q9NRJ2 163 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 RCC2Q9P258 522 aaKnown RBP14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 RNF150Q9ULK6 438 aa14.29□□□□□ -0.12
CLSTN1-201ENST00000361311 RBFOX3A6NFN3 312 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 METTL15P1P0C7V9 234 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 RAB31Q13636 194 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 IQCJQ1A5X6 159 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 TCTN1Q2MV58 587 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 POM121Q96HA1 1249 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 PACRGQ96M98 296 aaPredicted RBP14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 CA14Q9ULX7 337 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 SLC17A4Q9Y2C5 497 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 PIAS3Q9Y6X2 628 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 H3BP45 60 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 HMGB3O15347 200 aaKnown RBP14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 ADPRHP54922 357 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 ENDOGQ14249 297 aaKnown RBP14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF141Q15928 474 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 DEFB133Q30KQ1 61 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 MESTQ5EB52 335 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 LHX9Q9NQ69 397 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 KLHDC2Q9Y2U9 406 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 FAM157BP0CG42 384 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 APOBEC1P41238 236 aaKnown RBP14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 THEM4Q5T1C6 240 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 BATF2Q8N1L9 274 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 ZSCAN4Q8NAM6 433 aaPredicted RBP14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 OR14J1Q9UGF5 321 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 KLK13Q9UKR3 277 aa14.28□□□□□ -0.12
CLSTN1-201ENST00000361311 NR0B2Q15466 257 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF611Q8N823 705 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 COX14Q96I36 57 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 COL4A5P29400 1685 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 ZNF236Q9UL36 1845 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 ANKRD31Q8N7Z5 1873 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 ZBTB25P24278 435 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 RPL29P47914 159 aaKnown RBP14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 PKIAP61925 76 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 DEGS2Q6QHC5 323 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 OR4F5Q8NH21 305 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 OR4F4Q96R69 305 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 RYDENQ9NUL5 291 aaKnown RBP14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 ICAM5Q9UMF0 924 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 OSGIN2Q9Y236 505 aa14.27□□□□□ -0.12
CLSTN1-201ENST00000361311 HSBP1L1C9JCN9 74 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 GUSBP08236 651 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 DRAM2Q6UX65 266 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 ZNF600Q6ZNG1 722 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 SLC36A1Q7Z2H8 476 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 KISS1RQ969F8 398 aaPredicted RBP14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 NTNG2Q96CW9 530 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 MFRPQ9BY79 579 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 TNFRSF10CO14798 259 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 MPZL1O95297 269 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 SULT1A2P50226 295 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 HLA-DRB3P79483 266 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 MICBQ29980 383 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 OR8U1Q8NH10 309 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 SNX22Q96L94 193 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 LIPGQ9Y5X9 500 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 V9GYS6 101 aa14.27□□□□□ -0.13
CLSTN1-201ENST00000361311 GJE1A6NN92 205 aa14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 CD200P41217 278 aa14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 PSG6Q00889 435 aa14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 FAM174AQ8TBP5 190 aa14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 MR1Q95460 341 aa14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 HIST1H2BAQ96A08 127 aa14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 C8orf33Q9H7E9 229 aaPredicted RBP14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 RARRES3Q9UL19 164 aa14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 RBBP6Q7Z6E9 1792 aaKnown RBP14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 DICER1Q9UPY3 1922 aaKnown RBP14.26□□□□□ -0.13
CLSTN1-201ENST00000361311 FAM24AA6NFZ4 105 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms