RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SLC17A4Q9Y2C5 497 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 M0R135 149 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
SMC5-201ENST00000361138 TBXA2RP21731 343 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 ZNF799Q96GE5 643 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 HHIPQ96QV1 700 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 ALOX12BO75342 701 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 ADAP1O75689 374 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
SMC5-201ENST00000361138 DAOP14920 347 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 CD38P28907 300 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 SULT1A1P50225 295 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 CARD18P57730 90 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 PPP2CBP62714 309 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 PPP2CAP67775 309 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 SP6Q3SY56 376 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 NPEPL1Q8NDH3 523 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 CCL4L1Q8NHW4 92 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 NOSIPQ9Y314 301 aaKnown RBP12.51□□□□□ -0.41
SMC5-201ENST00000361138 SF3B6Q9Y3B4 125 aaKnown RBP12.51□□□□□ -0.41
SMC5-201ENST00000361138 MED19A0JLT2 244 aaPredicted RBP12.51□□□□□ -0.41
SMC5-201ENST00000361138 PLSCR5A0PG75 271 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 GCH1P30793 250 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 PTGFRP43088 359 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 CLEC18BQ6UXF7 455 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 ZNF66Q6ZN08 573 aa12.51□□□□□ -0.41
SMC5-201ENST00000361138 RGP1Q92546 391 aaPredicted RBP12.51□□□□□ -0.41
SMC5-201ENST00000361138 H0YIG0 161 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 DEGS1O15121 323 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 NRASP01111 189 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 ST6GAL1P15907 406 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 TLE1Q04724 770 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 ACOT6Q3I5F7 207 aaPredicted RBP12.5□□□□□ -0.41
SMC5-201ENST00000361138 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 PARP11Q9NR21 331 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 MYOTQ9UBF9 498 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
SMC5-201ENST00000361138 IGHV3-20A0A0C4DH32 117 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 SCRG1O75711 98 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 CCR2P41597 374 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 IL13RA2Q14627 380 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 PATE1Q8WXA2 126 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 RBFOX3A6NFN3 312 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 FKBP2P26885 142 aaKnown RBP12.5□□□□□ -0.41
SMC5-201ENST00000361138 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 UBE3DQ7Z6J8 389 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 ADAD2Q8NCV1 583 aaKnown RBP12.5□□□□□ -0.41
SMC5-201ENST00000361138 NOXO1Q8NFA2 376 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 OXGR1Q96P68 337 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 TRAPPC1Q9Y5R8 145 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 A0A1B0GX78 115 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 CST7O76096 145 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 APOA2P02652 100 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
SMC5-201ENST00000361138 SSR4P51571 173 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 MZT1Q08AG7 82 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 LTC4SQ16873 150 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 TOX2Q96NM4 488 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 SLC35D1Q9NTN3 355 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 OBP2AQ9NY56 170 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 ZNF814B7Z6K7 855 aa12.5□□□□□ -0.41
SMC5-201ENST00000361138 PLRG1O43660 514 aaKnown RBP12.5□□□□□ -0.41
SMC5-201ENST00000361138 MPTX1A8MV57 137 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 ABCD4O14678 606 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 DCDP81605 110 aaKnown RBP12.49□□□□□ -0.41
SMC5-201ENST00000361138 LAMTOR1Q6IAA8 161 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 PUSL1Q8N0Z8 303 aaKnown RBP12.49□□□□□ -0.41
SMC5-201ENST00000361138 OR2AE1Q8NHA4 323 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 VAMP8Q9BV40 100 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 RPH3ALQ9UNE2 315 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 VSIG4Q9Y279 399 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 TMED3Q9Y3Q3 217 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 WNK3Q9BYP7 1800 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 SPRY1O43609 319 aaPredicted RBP12.49□□□□□ -0.41
SMC5-201ENST00000361138 OLFM2O95897 454 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 CD1AP06126 327 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 OR3A4PP47883 348 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 PKIAP61925 76 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 RPS15P62841 145 aaKnown RBP12.49□□□□□ -0.41
SMC5-201ENST00000361138 OSR2Q8N2R0 312 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 VPS25Q9BRG1 176 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
SMC5-201ENST00000361138 TCAPO15273 167 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 PACRGQ96M98 296 aaPredicted RBP12.49□□□□□ -0.41
SMC5-201ENST00000361138 ALX4Q9H161 411 aaPredicted RBP12.49□□□□□ -0.41
SMC5-201ENST00000361138 FLRT3Q9NZU0 649 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 COX5AP20674 150 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 CDAP32320 146 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 GGTLC2Q14390 218 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 ZNF141Q15928 474 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 ZNF547Q8IVP9 402 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 MRGPRX3Q96LB0 322 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 ZDHHC11Q9H8X9 412 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 ACTL6BO94805 426 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 ABHD16AO95870 558 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 PNLIPRP2P54317 469 aa12.49□□□□□ -0.41
SMC5-201ENST00000361138 HLA-DRB3P79483 266 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms