RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 GSK3BP49841 420 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 MECP2P51608 486 aaKnown RBP4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 BDH1Q02338 343 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 SCARB2Q14108 478 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 DGUOKQ16854 277 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 RFX4Q33E94 735 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 KLHL12Q53G59 568 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 DEFB121Q5J5C9 76 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR2W3Q7Z3T1 314 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 MIER2Q8N344 545 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 TMEM239Q8WW34 195 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 ATP6V1G3Q96LB4 118 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 ZBTB18Q99592 522 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 SIKE1Q9BRV8 207 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 C1orf123Q9NWV4 160 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 SLC17A7Q9P2U7 560 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 ANGPT4Q9Y264 503 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 WNK2Q9Y3S1 2297 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 HMGB1P1B2RPK0 211 aaPredicted RBP4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 AQP2P41181 271 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 CTXN1P60606 82 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 MALLQ13021 153 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 KLRD1Q13241 179 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 C19orf54Q5BKX5 351 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 HMGN2P46Q86SG4 172 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 ZNF429Q86V71 674 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 Q8N1Y9 231 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 C10orf111Q8N326 155 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 DRAM1Q8N682 238 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 Q8N6K4 173 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 ZNF781Q8N8C0 355 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 RAX2Q96IS3 184 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 ZMAT4Q9H898 229 aa4.7□□□□□ -1.66
CDC42SE2-201ENST00000360515 IGKV1D-17A0A075B6S4 117 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 hCG_1809904A0A1W2PP81 198 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 A0A1W2PPE2 198 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 A0A1W2PR64 198 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 A0A1W2PRV1 198 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 BOLA2-SMG1P6H3BVE0 249 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 IGLV1-47P01700 117 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 ELANEP08246 267 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 GSTT2P0CG29 244 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 GSTT2BP0CG30 244 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 CRABP1P29762 137 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 NCALDP61601 193 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 HOXC5Q00444 222 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 HNRNPA0Q13151 305 aaKnown RBP4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 KIAA0141Q14154 515 aaPredicted RBP4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 SGCAQ16586 387 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 PRAMEF6Q5VXH4 476 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 Q6ZS46 218 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 CPLX4Q7Z7G2 160 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 MKXQ8IYA7 352 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 C8orf31Q8N9H6 132 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 CSNK2A3Q8NEV1 391 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 NFKBIDQ8NI38 313 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR5P3Q8WZ94 311 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 VPS33AQ96AX1 596 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 ITPKCQ96DU7 683 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 AKR1E2Q96JD6 320 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 NUF2Q9BZD4 464 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 NDEL1Q9GZM8 345 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 C20orf27Q9GZN8 174 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 SEMA6AQ9H2E6 1030 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 SLC25A10Q9UBX3 287 aaPredicted RBP4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 COMMD3-BMI1R4GMX3 469 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 C11orf98E9PRG8 122 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 NPPAP01160 153 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 POLR2JP52435 117 aaKnown RBP4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 ERVK11-1P61568 191 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 COQ5Q5HYK3 327 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 TSEN54Q7Z6J9 526 aaKnown RBP4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 WFDC3Q8IUB2 231 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 POC1AQ8NBT0 407 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 CCDC197Q8NCU1 140 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR13D1Q8NGV5 346 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 PITX2Q99697 317 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR51B6Q9H340 312 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 ONECUT1Q9UBC0 465 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 ATP6V1B1P15313 513 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 CTLA4P16410 223 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 DUSP7Q16829 419 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 TMEM200BQ69YZ2 307 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 SFRP4Q6FHJ7 346 aaPredicted RBP4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 PGAM4Q8N0Y7 254 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 PRRC1Q96M27 445 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 SPATA25Q9BR10 227 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 TNFRSF19Q9NS68 423 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 TMEM5Q9Y2B1 443 aa4.69□□□□□ -1.66
CDC42SE2-201ENST00000360515 STAB2Q8WWQ8 2551 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 HSPG2P98160 4391 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 MCIDASD6RGH6 385 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 ITM2AO43736 263 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 HOXD3P31249 432 aaPredicted RBP4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 GPR12P47775 334 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 DNM1P34Q6PK57 102 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 DPY19L2P2Q6ZN68 376 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 LHFPL2Q6ZUX7 228 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 TCF23Q7RTU1 214 aa4.68□□□□□ -1.66
CDC42SE2-201ENST00000360515 OR2K2Q8NGT1 345 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms