RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PERPQ96FX8 193 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 KIAA0100Q14667 2235 aaKnown RBP8.42□□□□□ -1.06
VPS13A-203ENST00000360280 ISL1P61371 349 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 ST8SIA1Q92185 356 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 GPR84Q9NQS5 396 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 SLC22A13Q9Y226 551 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 AKR7A3O95154 331 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 MELTFP08582 738 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 COX6CP09669 75 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 HIST3H3Q16695 136 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 ARIH2OSQ8N7S6 290 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 OR5AU1Q8NGC0 362 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 ZC3HAV1LQ96H79 300 aaKnown RBP8.42□□□□□ -1.06
VPS13A-203ENST00000360280 Q96M85 177 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM267Q0VDI3 215 aaPredicted RBP8.42□□□□□ -1.06
VPS13A-203ENST00000360280 FAAP20Q6NZ36 180 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 CSNK1G1Q9HCP0 422 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 SSC5DA1L4H1 1573 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 PLCH1Q4KWH8 1693 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 SOX4Q06945 474 aaPredicted RBP8.42□□□□□ -1.06
VPS13A-203ENST00000360280 FAM74A3Q4VXF1 159 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 Q56UQ5 140 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF687Q8N1G0 1237 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 GAL3ST2Q9H3Q3 398 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 MMP24Q9Y5R2 645 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 ZAR1LA6NP61 321 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 SOX15O60248 233 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 GPX2P18283 190 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 COL9A3Q14050 684 aaPredicted RBP8.42□□□□□ -1.06
VPS13A-203ENST00000360280 NAT8Q9UHE5 227 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 POMT2Q9UKY4 750 aa8.42□□□□□ -1.06
VPS13A-203ENST00000360280 GPANK1O95872 356 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 GUSBP08236 651 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 PRO1933Q9H354 126 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 NAGKQ9UJ70 344 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 MFNGO00587 321 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 ISLRO14498 428 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 DSCR3O14972 297 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 SPICQ8N5J4 248 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 OCIAD1Q9NX40 245 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 M0R082 166 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF141Q15928 474 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 ERASQ7Z444 233 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM116Q8NCL8 245 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 SNX22Q96L94 193 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 RNF2Q99496 336 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 SLC7A10Q9NS82 523 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 CD207Q9UJ71 328 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 OR2G2Q8NGZ5 317 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 S1PR5Q9H228 398 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 CAMTA1Q9Y6Y1 1673 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 SLCO4C1Q6ZQN7 724 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 PDPNQ86YL7 162 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 RAB37Q96AX2 223 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 G3V3Y1 287 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 PPP6CO00743 305 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 MAT1AQ00266 395 aaKnown RBP8.41□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM64Q6YI46 380 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 OR2W3Q7Z3T1 314 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 OR5C1Q8NGR4 320 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 EID2BQ96D98 161 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF391Q9UJN7 358 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 RALGAPA1Q6GYQ0 2036 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 RBP4P02753 201 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 CEBPDP49716 269 aaPredicted RBP8.41□□□□□ -1.06
VPS13A-203ENST00000360280 LIM2P55344 173 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 ELOVL1Q9BW60 279 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 PKD1L3Q7Z443 1732 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
VPS13A-203ENST00000360280 OR2T10Q8NGZ9 312 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 RSG1Q9BU20 258 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 OR4A47Q6IF82 309 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.41□□□□□ -1.06
VPS13A-203ENST00000360280 SLC25A33Q9BSK2 321 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 IER2Q9BTL4 223 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 TXNIPQ9H3M7 391 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 CDRT15L2A8MXV6 281 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 RHBDL1O75783 438 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 NUDCD2Q8WVJ2 157 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 DUSP21Q9H596 190 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 POU2F2P09086 479 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 STAG3L3P0CL85 134 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 EPXP11678 715 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 ACAA2P42765 397 aaKnown RBP8.41□□□□□ -1.06
VPS13A-203ENST00000360280 MRPS21P82921 87 aaKnown RBP8.41□□□□□ -1.06
VPS13A-203ENST00000360280 COL9A2Q14055 689 aaPredicted RBP8.41□□□□□ -1.06
VPS13A-203ENST00000360280 FUNDC1Q8IVP5 155 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 SLC17A5Q9NRA2 495 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.41□□□□□ -1.06
VPS13A-203ENST00000360280 MARCH5Q9NX47 278 aa8.41□□□□□ -1.06
VPS13A-203ENST00000360280 C1SP09871 688 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF25P17030 456 aaPredicted RBP8.4□□□□□ -1.06
VPS13A-203ENST00000360280 ACP1P24666 158 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 CLDN18P56856 261 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 SLC38A11Q08AI6 406 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 COL5A1-AS1Q5SY13 56 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 ATAD5Q96QE3 1844 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 PDE6DO43924 150 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 AQP6Q13520 282 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms