RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TMEM183BQ1AE95 376 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 PRSS3P2Q8NHM4 247 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 PHOSPHO2Q8TCD6 241 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 ZDHHC16Q969W1 377 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 WDR61Q9GZS3 305 aaKnown RBP14.45□□□□□ -0.1
COL18A1-203ENST00000359759 IL2RAP01589 272 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 INSL4Q14641 139 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 SHHQ15465 462 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 RPEL1Q2QD12 228 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 SLC16A13Q7RTY0 426 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 ADIPOR1Q96A54 375 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 ZNF385DQ9H6B1 395 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 LIMS3P0CW19 117 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 LIMS4P0CW20 117 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 MYF5P13349 255 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 ATF1P18846 271 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 SELENBP1Q13228 472 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 SULT1A2P50226 295 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 DEFB109BQ30KR1 87 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 MS4A10Q96PG2 267 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 TNFRSF19Q9NS68 423 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 ZNF391Q9UJN7 358 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 C5orf52A6NGY3 159 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 M0R1X1 148 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 FCN1O00602 326 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 MBTPS2O43462 519 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 CRYAAP02489 173 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 NPY1RP25929 384 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 WDR31Q8NA23 367 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 HS3ST3A1Q9Y663 406 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 HMX2A2RU54 273 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 M0QZ24 198 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 CYR61O00622 381 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 HYAL3O43820 417 aaPredicted RBP14.44□□□□□ -0.1
COL18A1-203ENST00000359759 FZD6O60353 706 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 CEACAM6P40199 344 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 PRSS42Q7Z5A4 293 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 RIMKLAQ8IXN7 391 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 OR2G2Q8NGZ5 317 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 AP5S1Q9NUS5 200 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 GNG4P50150 75 aa14.44□□□□□ -0.1
COL18A1-203ENST00000359759 FBP1P09467 338 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 HTR1DP28221 377 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 CD200P41217 278 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 KCNJ3P48549 501 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 PTCRAQ6ISU1 281 aaPredicted RBP14.43□□□□□ -0.1
COL18A1-203ENST00000359759 OR2M3Q8NG83 312 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 PELI1Q96FA3 418 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 SLC25A19Q9HC21 320 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 FER1L6Q2WGJ9 1857 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 MMP15P51511 669 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 GLDNQ6ZMI3 551 aaPredicted RBP14.43□□□□□ -0.1
COL18A1-203ENST00000359759 TGIF2LYQ8IUE0 185 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 OR1J1Q8NGS3 322 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 A0A1W2PR80 420 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 ABCD3P28288 659 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 OR5M9Q8NGP3 310 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 ST6GAL1P15907 406 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 CD27P26842 260 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 PPOXP50336 477 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 COTL1Q14019 142 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 NPEPL1Q8NDH3 523 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 GPR137Q96N19 417 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 GSX1Q9H4S2 264 aaPredicted RBP14.43□□□□□ -0.1
COL18A1-203ENST00000359759 LRP12Q9Y561 859 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 UPK1AO00322 258 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 ZNF737O75373 536 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 WNT1P04628 370 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 RPL24P83731 157 aaKnown RBP14.43□□□□□ -0.1
COL18A1-203ENST00000359759 ST3GAL2Q16842 350 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 RTL10Q7L3V2 364 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 ANKRD53Q8N9V6 530 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 OR2Z1Q8NG97 314 aa14.43□□□□□ -0.1
COL18A1-203ENST00000359759 MASP2O00187 686 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 CYC1P08574 325 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 LDLRAD1Q5T700 205 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 FAM78BQ5VT40 261 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 BTLAQ7Z6A9 289 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 MRGPREQ86SM8 312 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 OR8D4Q8NGM9 314 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 RNF2Q99496 336 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 C19orf43Q9BQ61 176 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 TMEM272A0A1B0GTI8 110 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 ETHE1O95571 254 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 CSN3P07498 182 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 CAMPP49913 170 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 FOXF1Q12946 379 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 TTC9Q92623 222 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 SLC25A22Q9H936 323 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 ADAMTS5Q9UNA0 930 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 FOXJ3Q9UPW0 622 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 GZMKP49863 264 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 TMEM128Q5BJH2 165 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 OR2W3Q7Z3T1 314 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 DND1Q8IYX4 353 aaKnown RBP14.42□□□□□ -0.1
COL18A1-203ENST00000359759 NOXO1Q8NFA2 376 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 TRGV10A0A0A0MS01 117 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 DSCR3O14972 297 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 RGS7BPQ6MZT1 257 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms