RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 DOK1Q99704 481 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 PARP12Q9H0J9 701 aaKnown RBP11.63□□□□□ -0.55
NLRC3-202ENST00000359128 FOXJ3Q9UPW0 622 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 NPTNQ9Y639 398 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 GALNSP34059 522 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 SLC51BQ86UW2 128 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 ZNF441Q8N8Z8 693 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 TMEM171Q8WVE6 324 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 ITPKCQ96DU7 683 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 GABARAPL3Q9BY60 117 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 FABP7O15540 132 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 ADAM20O43506 726 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 NME2P1O60361 137 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 S100A11P31949 105 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 MAGEB1P43366 347 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 PABPC1L2AQ5JQF8 200 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 UBE2FQ969M7 185 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 MCHR2Q969V1 340 aa11.63□□□□□ -0.55
NLRC3-202ENST00000359128 DUS3LQ96G46 650 aaKnown RBP11.63□□□□□ -0.55
NLRC3-202ENST00000359128 DUSP15Q9H1R2 295 aaPredicted RBP11.63□□□□□ -0.55
NLRC3-202ENST00000359128 A0A1B0GTQ1 180 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 C3orf80F5H4A9 247 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 COX5AP20674 150 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 MAGEA5P43359 124 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 LGALS7P47929 136 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 CLPPQ16740 277 aaPredicted RBP11.62□□□□□ -0.55
NLRC3-202ENST00000359128 PRR27Q6MZM9 219 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 NUDCD2Q8WVJ2 157 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 RASL11BQ9BPW5 248 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 ZAR1LA6NP61 321 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 ZNF90Q03938 601 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 DMRTC1Q5HYR2 192 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 STPG1Q5TH74 334 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 NKG7Q16617 165 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 PNLIPRP3Q17RR3 467 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 ZNF774Q6NX45 483 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 GATA6Q92908 595 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 PRDM7Q9NQW5 492 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 CLEC18AA5D8T8 446 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 C3AR1Q16581 482 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 PRICKLE4Q2TBC4 344 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 CLEC18CQ8NCF0 446 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 PKMYT1Q99640 499 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 PECRQ9BY49 303 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 E5RGE8 158 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 CCL2P13500 99 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 CASP3P42574 277 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 LCN15Q6UWW0 184 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 ASCL5Q7RTU5 278 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 SMRP1Q8NCR6 262 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 ARHGDIGQ99819 225 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 CHRDL1Q9BU40 450 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 COA4Q9NYJ1 87 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 SLC25A37Q9NYZ2 338 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 NSG2Q9Y328 171 aa11.62□□□□□ -0.55
NLRC3-202ENST00000359128 ARRDC5A6NEK1 342 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 K7ESF4 209 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 BAMBIQ13145 260 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 FCN2Q15485 313 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 RHBDD2Q6NTF9 364 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 HIST2H3AQ71DI3 136 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 SPSB1Q96BD6 273 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 THYN1Q9P016 225 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 IGHV5-10-1A0A0J9YXX1 117 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 LIPAP38571 399 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 CDK5R1Q15078 307 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 PAQR6Q6TCH4 344 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 ZNF574Q6ZN55 896 aaPredicted RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 OR2Y1Q8NGV0 311 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 PTDSS2Q9BVG9 487 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 SEBOXQ9HB31 216 aaPredicted RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 TREM2Q9NZC2 230 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 RCL1Q9Y2P8 373 aaKnown RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 UGT2A1Q9Y4X1 527 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 FGF2P09038 288 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 PCMT1P22061 227 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 EPHA2P29317 976 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 COL22A1Q8NFW1 1626 aaPredicted RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 CYR61O00622 381 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 NUPL2O15504 423 aaKnown RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 FCGR3BO75015 233 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 ZNF32P17041 273 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 RPS19P39019 145 aaKnown RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 TIPARPQ7Z3E1 657 aaKnown RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 OR4S1Q8NGB4 309 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 PTPMT1Q8WUK0 201 aaPredicted RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 NAGKQ9UJ70 344 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 GFRA3O60609 400 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 CCL4P13236 92 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 FUT3P21217 361 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 AVPR2P30518 371 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 H3F3AP84243 136 aa11.61□□□□□ -0.55
NLRC3-202ENST00000359128 TOMM34Q15785 309 aaPredicted RBP11.61□□□□□ -0.55
NLRC3-202ENST00000359128 HAGHQ16775 308 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms