RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ACSM6Q6P461 480 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 HES4Q9HCC6 221 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 AANATQ16613 207 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 SPINK9Q5DT21 86 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 NT5CQ8TCD5 201 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 EXTL1Q92935 676 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 AAMDCQ9H7C9 122 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 MEX3AA1L020 520 aaKnown RBP16.52■□□□□ 0.23
SHANK1-202ENST00000359082 POU2F2P09086 479 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 SULT1A3P0DMM9 295 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 SULT1A4P0DMN0 295 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 WIPI1Q5MNZ9 446 aaPredicted RBP16.52■□□□□ 0.23
SHANK1-202ENST00000359082 PTOV1Q86YD1 416 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 FOXB1Q99853 325 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 NAGKQ9UJ70 344 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 FOXJ3Q9UPW0 622 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 LSM2Q9Y333 95 aaKnown RBP16.52■□□□□ 0.23
SHANK1-202ENST00000359082 KCNE3Q9Y6H6 103 aa16.52■□□□□ 0.23
SHANK1-202ENST00000359082 CEACAM5P06731 702 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 OPRK1P41145 380 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 GSG1Q2KHT4 349 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 LINC00303Q3SY05 128 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 OTUD1Q5VV17 481 aaPredicted RBP16.51■□□□□ 0.23
SHANK1-202ENST00000359082 H3BMH7 237 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 LIMS3P0CW19 117 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 LIMS4P0CW20 117 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 FAM27D1Q5T7N8 215 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 DGAT2L6Q6ZPD8 337 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 OR1F12Q8NHA8 337 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 HGDQ93099 445 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 RHNO1Q9BSD3 238 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 HDGFL3Q9Y3E1 203 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 ANKRD12Q6UB98 2062 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 VMA21Q3ZAQ7 101 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 OR2A1Q8NGT9 310 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 PARD6AQ9NPB6 346 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 A0A087WUJ7 227 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 ARRDC5A6NEK1 342 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 EPXP11678 715 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 ZNF83P51522 516 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 PPP1CBP62140 327 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 RNASEKQ6P5S7 137 aaKnown RBP16.51■□□□□ 0.23
SHANK1-202ENST00000359082 DND1Q8IYX4 353 aaKnown RBP16.51■□□□□ 0.23
SHANK1-202ENST00000359082 P4HTMQ9NXG6 502 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 PNLIPRP3Q17RR3 467 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 SPNS3Q6ZMD2 512 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 C20orf196Q8IYI0 205 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 TAAR9Q96RI9 348 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 BCL2L10Q9HD36 194 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 CCDC187A0A096LP49 1063 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 IL5P05113 134 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 FFAR4Q5NUL3 377 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 GTF2H5Q6ZYL4 71 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 LRRC61Q9BV99 259 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 SPNS1Q9H2V7 528 aa16.51■□□□□ 0.23
SHANK1-202ENST00000359082 ZNF429Q86V71 674 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 OR11G2Q8NGC1 345 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 APOBEC3DQ96AK3 386 aaPredicted RBP16.5■□□□□ 0.23
SHANK1-202ENST00000359082 KLK8O60259 260 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 SPINK4O60575 86 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 FAM3AP98173 230 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 AQP6Q13520 282 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 SP6Q3SY56 376 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 BLNKQ8WV28 456 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 PHIPQ8WWQ0 1821 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 GYPAP02724 150 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 MYPOPQ86VE0 399 aaPredicted RBP16.5■□□□□ 0.23
SHANK1-202ENST00000359082 GALNT16Q8N428 558 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 RHOFQ9HBH0 211 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 PTBP3O95758 552 aaKnown RBP16.5■□□□□ 0.23
SHANK1-202ENST00000359082 RNF212Q495C1 297 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 GAL3ST2Q9H3Q3 398 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 FGF20Q9NP95 211 aaPredicted RBP16.5■□□□□ 0.23
SHANK1-202ENST00000359082 POMT2Q9UKY4 750 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 ICAM5Q9UMF0 924 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 PYCARD-AS1I3L0S3 204 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 J3QR89 54 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 G0S2P27469 103 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 FGF14Q92915 247 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 MVB12AQ96EY5 273 aa16.5■□□□□ 0.23
SHANK1-202ENST00000359082 OR2M5A3KFT3 312 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 ST8SIA5O15466 376 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 KRASP01116 189 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 IGLV3-27P01718 113 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 SLC25A5P05141 298 aaKnown RBP16.49■□□□□ 0.23
SHANK1-202ENST00000359082 CDC20Q12834 499 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 FAM219BQ5XKK7 198 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 ABI3BPQ7Z7G0 1075 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 BCL2L2Q92843 193 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-202ENST00000359082 NOL4LQ96MY1 436 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-202ENST00000359082 TEX101Q9BY14 249 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 TRPM3Q9HCF6 1732 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-202ENST00000359082 TRGV5A0A0B4J1U4 118 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 TGOLN2O43493 480 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 FBP1P09467 338 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 ZNF766Q5HY98 468 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 FAHD1Q6P587 224 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 ANKRD53Q8N9V6 530 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 SPACA9Q96E40 222 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-202ENST00000359082 CXorf58Q96LI9 332 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms