RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 VPS29Q9UBQ0 182 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 RNF115Q9Y4L5 304 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 ZFHX2Q9C0A1 2572 aaPredicted RBP8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 A8MVM7 634 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 EPPINO95925 133 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 SLC35G6P0C7Q6 338 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 GSTM3P21266 225 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 SLC6A12P48065 614 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 SMIM11AP58511 58 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 GGTA1PQ4G0N0 100 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 TMPRSS7Q7RTY8 843 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 P4HA3Q7Z4N8 544 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 ZNF615Q8N8J6 731 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 LINC01555Q8NAE3 123 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 OR5T1Q8NG75 326 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 SEH1LQ96EE3 360 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 COX14Q96I36 57 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 SAMD8Q96LT4 415 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 DPEP2Q9H4A9 486 aa8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 MRPS2Q9Y399 296 aaKnown RBP8.28□□□□□ -1.08
SMARCAL1-202ENST00000358207 LAMA5O15230 3695 aa8.27□□□□□ -1.08
SMARCAL1-202ENST00000358207 C13orf42A0A1B0GVH6 325 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 PRSS38A1L453 326 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 C4orf47A7E2U8 309 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 CAPZBP47756 277 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 ACSM2AQ08AH3 577 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 IQCJQ1A5X6 159 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 PGGHGQ32M88 737 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 COL5A1-AS1Q5SY13 56 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 ACSM2BQ68CK6 577 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 ZNF101Q8IZC7 436 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 CASTOR1Q8WTX7 329 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 PCBD2Q9H0N5 130 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 CST11Q9H112 138 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 FSCN3Q9NQT6 498 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 VSIG4Q9Y279 399 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 A6NIZ1 184 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 GLOD5A6NK44 160 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 H3BQ15 152 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 NBEAP1P0C6P0 100 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 ZNF735P0CB33 412 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 ALPPL2P10696 532 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 KLK2P20151 261 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 DTYMKP23919 212 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 SOAT1P35610 550 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 HSF1Q00613 529 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 ZNF616Q08AN1 781 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 TDRG1Q3Y452 100 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 TP53I3Q53FA7 332 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 FBXO42Q6P3S6 717 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 LEG1Q6P5S2 330 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 ADAMTSL4Q6UY14 1074 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 OR4X1Q8NH49 305 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 RARRES2Q99969 163 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 GINS3Q9BRX5 216 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 SLC17A5Q9NRA2 495 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 FOXD3Q9UJU5 478 aaPredicted RBP8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 GPR34Q9UPC5 381 aa8.27□□□□□ -1.09
SMARCAL1-202ENST00000358207 A0A087WV48 116 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 UNC119BA6NIH7 251 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 H0YL77 283 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 CTXN2P0C2S0 81 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 PVRP15151 417 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 EFNB2P52799 333 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 PPP1CAP62136 330 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 UBE2V1Q13404 147 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 SOHLH1Q5JUK2 328 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 METRNLQ641Q3 311 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 MEPCEQ7L2J0 689 aaKnown RBP8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 WDFY1Q8IWB7 410 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 SLC22A18ASQ8N1D0 253 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 STPG4Q8N801 248 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 PLPP5Q8NEB5 264 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 WFIKKN1Q96NZ8 548 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 OR10A5Q9H207 317 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 TAS2R8Q9NYW2 309 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 ARID1AO14497 2285 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 C5orf51A6NDU8 294 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 OR4C45A6NMZ5 311 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 H0YIV9 168 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 MPC1LP0DKB6 136 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 PTNP21246 168 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 SLC25A1P53007 311 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 TAS2R19P59542 299 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 TRIM61Q5EBN2 209 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 SLC35D2Q76EJ3 337 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 LYG2Q86SG7 212 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 ZNF563Q8TA94 476 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 SGCZQ96LD1 299 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 METTL8Q9H825 291 aaKnown RBP8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 ZNF430Q9H8G1 570 aaPredicted RBP8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 TMEM74BQ9NUR3 256 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 RAB22AQ9UL26 194 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 SSUH2Q9Y2M2 353 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 DYRK1BQ9Y463 629 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 V9GY05 133 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 A0A087WWC5 75 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 PRAMEF27A3QJZ7 478 aa8.26□□□□□ -1.09
SMARCAL1-202ENST00000358207 B4DGG1 531 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms