RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 NPIPA2E9PIF3 369 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 NPIPA3F8WFD2 350 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 IL2RAP01589 272 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 DUX4L2P0CJ85 424 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 DUX4L3P0CJ86 424 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 DUX4L4P0CJ87 422 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 DUX4L5P0CJ88 424 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 DUX4L6P0CJ89 424 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 DUX4L7P0CJ90 424 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 VSIG8P0DPA2 414 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 SLC25A4P12235 298 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 ZP3P21754 424 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 MSR1P21757 451 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 RAC1P63000 192 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 SORDQ00796 357 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 OC90Q02509 493 aaPredicted RBP12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 CHAF1BQ13112 559 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF345Q14585 488 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 SSPNQ14714 243 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 TBR1Q16650 682 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 FAM57BQ71RH2 274 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 LYG2Q86SG7 212 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 BEST3Q8N1M1 668 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 OR9K2Q8NGE7 335 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 OR10R2Q8NGX6 335 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 UCN2Q96RP3 112 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 SOX7Q9BT81 388 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF416Q9BWM5 594 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 REG4Q9BYZ8 158 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 ZMAT3Q9HA38 289 aaKnown RBP12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 GPR84Q9NQS5 396 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF319Q9P2F9 582 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 DUX4Q9UBX2 424 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 PFDN2Q9UHV9 154 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 KIAA1549Q9HCM3 1950 aa12.55□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF462Q96JM2 2506 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 A0A0J9YW62 118 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 WDPCPO95876 746 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 PRB1P04280 392 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 GSTP1P09211 210 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 UBBP0CG47 229 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF250P15622 560 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 ABOP16442 354 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 ANOS1P23352 680 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 ZBTB25P24278 435 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 MPGP29372 298 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF93P35789 620 aaPredicted RBP12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 RPS27AP62979 156 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 UBA52P62987 128 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 SCGB2B2Q4G0G5 96 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 ACTBL2Q562R1 376 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 SFRP5Q5T4F7 317 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 AWAT2Q6E213 333 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 DOK3Q7L591 496 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 OR5AS1Q8N127 324 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 TMEM123Q8N131 208 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 CHST4Q8NCG5 386 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 FAM71F1Q96KD3 344 aaPredicted RBP12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 SGCZQ96LD1 299 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF385AQ96PM9 386 aaKnown RBP12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 PIGQQ9BRB3 760 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 NELFAQ9H3P2 528 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 IFT46Q9NQC8 304 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 ANAPC10Q9UM13 185 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 KCNMB2Q9Y691 235 aa12.54□□□□□ -0.4
NIPAL3-203ENST00000358028 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 GJE1A6NN92 205 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 OR2F2O95006 317 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 MGMTP16455 207 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 CTSSP25774 331 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 GUCA1AP43080 201 aaPredicted RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 TAS2R31P59538 309 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 OR2F1Q13607 317 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 OR5M9Q8NGP3 310 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 KCNG3Q8TAE7 436 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 PCNPQ8WW12 178 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 VSIG4Q9Y279 399 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 SPENQ96T58 3664 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 OR5H14A6NHG9 310 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 ARGFXA6NJG6 315 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 KRBOX1C9JBD0 128 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 TNFSF11O14788 317 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 HPP00738 406 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 P04436 131 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 ICAM2P13598 275 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 NAT1P18440 290 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 SRD5A2P31213 254 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 CASRP41180 1078 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 SUCLG1P53597 346 aaKnown RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 B3GALT5-AS1P59052 145 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 Q0VFX4 171 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 PNLIPRP3Q17RR3 467 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF660Q6AZW8 331 aaPredicted RBP12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 ZNF546Q86UE3 836 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 ANGPTL5Q86XS5 388 aa12.53□□□□□ -0.4
NIPAL3-203ENST00000358028 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms