RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 OR5B21A6NL26 309 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 CRYABP02511 175 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 HOXC4P09017 264 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 HLA-GP17693 338 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 VAX1Q5SQQ9 334 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 FAM216AQ8WUB2 273 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 MUCL1Q96DR8 90 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 HEYLQ9NQ87 328 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 GOLT1BQ9Y3E0 138 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 NKX6-3A6NJ46 265 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 MRPL33O75394 65 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 EIF4EP06730 217 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 DAOP14920 347 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 G6PCP35575 357 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TAAR2Q9P1P5 351 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 MMP24Q9Y5R2 645 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 FRG2CA6NGY1 282 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 POU3F2P20265 443 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 ALOX5APP20292 161 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 AMTP48728 403 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 GNG4P50150 75 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 PTTG1IPP53801 180 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 FAM189BP81408 668 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 SEMG2Q02383 582 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM88Q6PEY1 159 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 GPR32P1Q8NGA4 272 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 PMCHL2Q9BQD1 86 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 GSX1Q9H4S2 264 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF816-ZNF321PA0A0X1KG74 233 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 DHRS7CA6NNS2 312 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TERTO14746 1132 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 HIST1H1BP16401 226 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 NPPBP16860 134 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 CD1CP29017 333 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 GALR1P47211 349 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 FAM3AP98173 230 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TNRC6AQ8NDV7 1962 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TRAV9-1A0A075B6T8 112 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 CLEC18AA5D8T8 446 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF860A6NHJ4 632 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 DCTDP32321 178 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 AMIGO3Q86WK7 504 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 CLEC18CQ8NCF0 446 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 CCDC74AQ96AQ1 378 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 CHST2Q9Y4C5 530 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 RBFOX3A6NFN3 312 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 ZBTB42B2RXF5 422 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 M0QYG6 137 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 OR10J1P30954 320 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 CTSCP53634 463 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 FZD2Q14332 565 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TEAD2Q15562 447 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 GUCA2BQ16661 112 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 SYT9Q86SS6 491 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 SLC25A42Q86VD7 318 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 RELL2Q8NC24 303 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 LMX1AQ8TE12 382 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 APOBEC3DQ96AK3 386 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 SDF2Q99470 211 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 PPIL1Q9Y3C6 166 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF732B4DXR9 585 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 UTS2O95399 124 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 RAD52P43351 418 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 PDZD11Q5EBL8 140 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 FAM26DQ5JW98 314 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 LRRTM3Q86VH5 581 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 SLC16A11Q8NCK7 471 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 OR52N5Q8NH56 324 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 MACROD1Q9BQ69 325 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 PISDQ9UG56 409 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 DAPP1Q9UN19 280 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 LCTP09848 1927 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 HIST1H1DP16402 221 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 LINC00303Q3SY05 128 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM176BQ3YBM2 270 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 C19orf47Q8N9M1 422 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 OR10D4PQ8NGN7 298 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 A0A1W2PP55 124 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 M0R296 226 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TAPBPO15533 448 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 SEMA4FO95754 770 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 HNF1AP20823 631 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 NPBWR2P48146 333 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 AWAT1Q58HT5 328 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 OR13C5Q8NGS8 318 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 VSTM2AQ8TAG5 236 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 HMGCLL1Q8TB92 370 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 SLCO1B1Q9Y6L6 691 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF207O43670 478 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 SNRPEP62304 92 aaKnown RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 OR4D6Q8NGJ1 314 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 C5orf52A6NGY3 159 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 DDNO94850 711 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 LIPFP07098 398 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 FUT4P22083 530 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 GDF6Q6KF10 455 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF707Q96C28 371 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-202ENST00000357162 HHIPL1Q96JK4 782 aa5.94□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM147Q9BVK8 224 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms