RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 F2RL2O00254 374 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 ADAM11O75078 769 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 COX5AP20674 150 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 LSAMPQ13449 338 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 BCORP1Q8N888 145 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 C5orf17Q8NAS9 161 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 ING1Q9UK53 422 aaPredicted RBP15.61■□□□□ 0.09
COL27A1-201ENST00000356083 TOPAZ1Q8N9V7 1692 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 DOCK3Q8IZD9 2030 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 OR2W5A6NFC9 320 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 FCGR3BO75015 233 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 TGFBR1P36897 503 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 PRRX1P54821 245 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 ADPRHL1Q8NDY3 354 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 UBE2FQ969M7 185 aa15.61■□□□□ 0.09
COL27A1-201ENST00000356083 PPP1CBP62140 327 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 OR2F1Q13607 317 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 SIX1Q15475 284 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-201ENST00000356083 ZNF574Q6ZN55 896 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-201ENST00000356083 ZNF519Q8TB69 540 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 TMEM56Q96MV1 263 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 SIRT5Q9NXA8 310 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 TMEM202A6NGA9 273 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 TOX3O15405 576 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-201ENST00000356083 JTBO76095 146 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 TNFRSF1AP19438 455 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 PAFAH1B2P68402 229 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 SLC35B4Q969S0 331 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 SLC25A21Q9BQT8 299 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-201ENST00000356083 MBNL1Q9NR56 388 aaKnown RBP15.6■□□□□ 0.09
COL27A1-201ENST00000356083 TRAPPC1Q9Y5R8 145 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 CCDC187A0A096LP49 1063 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 ZNF195O14628 629 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 TFPI2P48307 235 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 RELAQ04206 551 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 FAM109BQ6ICB4 259 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-201ENST00000356083 FECHP22830 423 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 PRRX2Q99811 253 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 MYOZ1Q9NP98 299 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-201ENST00000356083 ORM1P02763 201 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 BSGP35613 385 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 ZNF841Q6ZN19 808 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 RASL11BQ9BPW5 248 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 H3BMH7 237 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 PCK2Q16822 640 aa15.6■□□□□ 0.09
COL27A1-201ENST00000356083 SLC25A43Q8WUT9 341 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-201ENST00000356083 TMEM200CA6NKL6 621 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 SLC2A10O95528 541 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 SRSF9Q13242 221 aaKnown RBP eCLIP15.59■□□□□ 0.097e-7■■□□□ 12.5
COL27A1-201ENST00000356083 ATP5SQ99766 215 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 IGHV3-43A0A0B4J1X8 118 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 FAM87AP0C7U9 286 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 IGHV3-43DP0DP04 118 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 CCL2P13500 99 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 POLR2IP36954 125 aaKnown RBP15.59■□□□□ 0.09
COL27A1-201ENST00000356083 ACAA2P42765 397 aaKnown RBP15.59■□□□□ 0.09
COL27A1-201ENST00000356083 LIPNQ5VXI9 398 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 HDAC8Q9BY41 377 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 NKX6-2Q9C056 277 aaPredicted RBP15.59■□□□□ 0.09
COL27A1-201ENST00000356083 SNNO75324 88 aaPredicted RBP15.59■□□□□ 0.09
COL27A1-201ENST00000356083 ACP1P24666 158 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 CCSMST1Q4G0I0 132 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 ZIC5Q96T25 663 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 ANKRD60Q9BZ19 345 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 GFYI3L273 518 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 HES3Q5TGS1 186 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 TMED6Q8WW62 240 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 MRAP2Q96G30 205 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 OR2A14Q96R47 310 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 NIPSNAP1Q9BPW8 284 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 RNF24Q9Y225 148 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 UQCRFS1P47985 274 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 CLEC9AQ6UXN8 241 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 THSD4Q6ZMP0 1018 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 Q7L0L9 218 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 TIPARPQ7Z3E1 657 aaKnown RBP15.59■□□□□ 0.09
COL27A1-201ENST00000356083 CELF2-AS1Q8N7Q2 184 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 CCL4L1Q8NHW4 92 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 SPACA9Q96E40 222 aaPredicted RBP15.59■□□□□ 0.09
COL27A1-201ENST00000356083 GNRHR2Q96P88 292 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 PHF7Q9BWX1 381 aaPredicted RBP15.59■□□□□ 0.09
COL27A1-201ENST00000356083 TRBV23-1A0A0A0MS06 115 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 TRABD2BA6NFA1 517 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 KIAA1324LA8MWY0 1029 aaPredicted RBP15.59■□□□□ 0.09
COL27A1-201ENST00000356083 RFX2P48378 723 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 PNLIPRP2P54317 469 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 LAMP3Q9UQV4 416 aa15.59■□□□□ 0.09
COL27A1-201ENST00000356083 GPANK1O95872 356 aa15.58■□□□□ 0.09
COL27A1-201ENST00000356083 GUCA2BQ16661 112 aa15.58■□□□□ 0.09
COL27A1-201ENST00000356083 PIGMQ9H3S5 423 aa15.58■□□□□ 0.09
COL27A1-201ENST00000356083 SMOC1Q9H4F8 434 aa15.58■□□□□ 0.09
COL27A1-201ENST00000356083 FAM24AA6NFZ4 105 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 K7ESF4 209 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 DLX1P56177 255 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 ALDOCP09972 364 aaKnown RBP15.58■□□□□ 0.08
COL27A1-201ENST00000356083 CEBPEQ15744 281 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 MUC15Q8N387 334 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 CIB3Q96Q77 187 aaPredicted RBP15.58■□□□□ 0.08
COL27A1-201ENST00000356083 ADIPOQQ15848 244 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 FAM162BQ5T6X4 162 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms