RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 KRT77Q7Z794 578 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 SCCPDHQ8NBX0 429 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 GCDHQ92947 438 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 OR8B4Q96RC9 309 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 IL4I1Q96RQ9 567 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 APOL4Q9BPW4 351 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 PCGF1Q9BSM1 259 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 MS4A7Q9GZW8 240 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 SEMA6AQ9H2E6 1030 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 RNPEPL1Q9HAU8 725 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 ADGRL4Q9HBW9 690 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 KRT84Q9NSB2 600 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 SNTG1Q9NSN8 517 aa13.83□□□□□ -0.2
PDLIM7-201ENST00000355572 AKR7A2O43488 359 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 ENSAO43768 121 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 CST4P01036 141 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 APOC1P02654 83 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 HOXB6P17509 224 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 PRTN3P24158 256 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 BAMBIQ13145 260 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 STUMQ69YW2 141 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 BTN2A1Q7KYR7 527 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 GALNT4Q8N4A0 578 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 CSNK2A3Q8NEV1 391 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 JMJD8Q96S16 334 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 CIB1Q99828 191 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 NIPAL2Q9H841 368 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 ERVK-18Q9QC07 812 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 KAAG1Q9UBP8 84 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 AP4S1Q9Y587 144 aa13.82□□□□□ -0.2
PDLIM7-201ENST00000355572 CENPVL3A0A0U1RRI6 287 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 ZNF879B4DU55 563 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 G3V2T6 193 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 TMPRSS2O15393 492 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 APOL3O95236 402 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 TTRP02766 147 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 ARF6P62330 175 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 ESRRGP62508 458 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 ROM1Q03395 351 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 FAM76BQ5HYJ3 339 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 CEP78Q5JTW2 689 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 C1orf146Q5VVC0 180 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 MEPCEQ7L2J0 689 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 KRT74Q7RTS7 529 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 TMEM163Q8TC26 289 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 OR51E1Q8TCB6 317 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 DNAJC9Q8WXX5 260 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 ST8SIA4Q92187 359 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 FAM71F1Q96KD3 344 aaPredicted RBP13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 PBOV1Q9GZY1 135 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 RGCCQ9H4X1 137 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 SP140LQ9H930 580 aa13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 MRM2Q9UI43 246 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-201ENST00000355572 TMEM269A0A1B0GVZ9 245 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 HKR1P10072 659 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 FAHP16930 419 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 CFL1P23528 166 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 FASP25445 335 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 GNALP38405 381 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 NPY4RP50391 375 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 GPM6AP51674 278 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 CXCR4P61073 352 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 PDZD9Q8IXQ8 264 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 SLC35F2Q8IXU6 374 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 ZNF679Q8IYX0 411 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 UBE2FQ969M7 185 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 RNF170Q96K19 258 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 WDFY2Q96P53 400 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 GAFA1Q96PS6 74 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 CNN2Q99439 309 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 ELL3Q9HB65 397 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 GPR84Q9NQS5 396 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 RPUSD1Q9UJJ7 312 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 MPC1Q9Y5U8 109 aa13.8□□□□□ -0.2
PDLIM7-201ENST00000355572 A0A0U1RQV5 110 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 A0A1B0GTI1 187 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 A6NIN4 97 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 SAC3D1A6NKF1 404 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 HOXA3O43365 443 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 TOX4O94842 621 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 RNASE1P07998 156 aaKnown RBP13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 TGM4P49221 684 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 IKZF1Q13422 519 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 DGUOKQ16854 277 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 NXNL2Q5VZ03 156 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 CCDC121Q6ZUS5 278 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 ASRGL1Q7L266 308 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 ZDHHC23Q8IYP9 409 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 LY6G5BQ8NDX9 201 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 ZNF488Q96MN9 340 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 RAB3IPQ96QF0 476 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 TBX5Q99593 518 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 MICU1Q9BPX6 476 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 RTL8AQ9BWD3 113 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 OR51I2Q9H344 312 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 PRDM13Q9H4Q3 707 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 TNFRSF19Q9NS68 423 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 HAO2Q9NYQ3 351 aa13.79□□□□□ -0.2
PDLIM7-201ENST00000355572 NUFIP1Q9UHK0 495 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms