RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 C19orf53Q9UNZ5 99 aaPredicted RBP12.9□□□□□ -0.34
SPPL3-201ENST00000353487 SELENOKQ9Y6D0 94 aa12.9□□□□□ -0.34
SPPL3-201ENST00000353487 ELOA3CA0A087WX78 387 aaPredicted RBP12.9□□□□□ -0.35
SPPL3-201ENST00000353487 TMEM272A0A1B0GTI8 110 aa12.9□□□□□ -0.35
SPPL3-201ENST00000353487 USF1P22415 310 aaPredicted RBP12.9□□□□□ -0.35
SPPL3-201ENST00000353487 CD200P41217 278 aa12.9□□□□□ -0.35
SPPL3-201ENST00000353487 FGF8P55075 233 aaPredicted RBP12.9□□□□□ -0.35
SPPL3-201ENST00000353487 TMEM244Q5VVB8 128 aa12.9□□□□□ -0.35
SPPL3-201ENST00000353487 ABLIM2Q6H8Q1 611 aa12.9□□□□□ -0.35
SPPL3-201ENST00000353487 ZNF813Q6ZN06 617 aa12.9□□□□□ -0.35
SPPL3-201ENST00000353487 ZAR1Q86SH2 424 aa12.9□□□□□ -0.35
SPPL3-201ENST00000353487 C1orf198Q9H425 327 aa12.9□□□□□ -0.35
SPPL3-201ENST00000353487 MRPS28Q9Y2Q9 187 aaKnown RBP12.9□□□□□ -0.35
SPPL3-201ENST00000353487 RNGTTO60942 597 aaKnown RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 PNMTP11086 282 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 KITLGP21583 273 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 FBLP22087 321 aaKnown RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 FCER1GP30273 86 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 ENDOGQ14249 297 aaKnown RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 OR6C3Q9NZP0 311 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 FRRS1LQ9P0K9 344 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 COA3Q9Y2R0 106 aaPredicted RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 OTOFQ9HC10 1997 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 C9orf170A2RU37 121 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 SLC17A2O00624 439 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 ZNF728P0DKX0 622 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 ZNF93P35789 620 aaPredicted RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 TFPI2P48307 235 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 RPL18Q07020 188 aaKnown RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 SRSF5Q13243 272 aaKnown RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 SLC35D3Q5M8T2 416 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 LEMD1Q68G75 181 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 GLIPR1L1Q6UWM5 242 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 DCXRQ7Z4W1 244 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 ZNF440Q8IYI8 595 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 REG4Q9BYZ8 158 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 UBQLN4Q9NRR5 601 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 INSL6Q9Y581 213 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 MKI67P46013 3256 aaKnown RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 NKX2-1P43699 371 aaPredicted RBP12.89□□□□□ -0.35
SPPL3-201ENST00000353487 UBE2G2P60604 165 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 PLCXD2Q0VAA5 305 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 TMEM215Q68D42 235 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 WBP2NLQ6ICG8 309 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 RNF128Q8TEB7 428 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 MCHR2Q969V1 340 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 NKX2-4Q9H2Z4 354 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 SMOC1Q9H4F8 434 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 B9D1Q9UPM9 204 aa12.89□□□□□ -0.35
SPPL3-201ENST00000353487 NYNRINQ9P2P1 1898 aaKnown RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 TGIF2-C20orf24A0A0A6YYL0 155 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 PRRT4C9JH25 899 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 MFNGO00587 321 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 EPPINO95925 133 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 WDR25Q64LD2 544 aaPredicted RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 ROBO4Q8WZ75 1007 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 PRRX2Q99811 253 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 FAM173AQ9BQD7 235 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 MYOTQ9UBF9 498 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 RCL1Q9Y2P8 373 aaKnown RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 A0A087WV48 116 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 M0QZK8 103 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 GGCTO75223 188 aaKnown RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 OR7C1O76099 320 aaPredicted RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 CLRN1P58418 232 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 TPPP2P59282 170 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 SRSF3P84103 164 aaKnown RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 POU3F1Q03052 451 aaPredicted RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 IL10RAQ13651 578 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 SHISA6Q6ZSJ9 500 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 PRSS41Q7RTY9 318 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 OR51F2Q8NH61 342 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 OIT3Q8WWZ8 545 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 FGF13Q92913 245 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 PIK3IP1Q96FE7 263 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 PRODH2Q9UF12 536 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 MRM2Q9UI43 246 aaKnown RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 TNFSF18Q9UNG2 199 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 GREM1O60565 184 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 OR2A4O95047 310 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 ONECUT2O95948 504 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 CRHP06850 196 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 GLRA1P23415 457 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 AMTP48728 403 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 ARSJQ5FYB0 599 aaPredicted RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 DHRS7BQ6IAN0 325 aaPredicted RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 WDR34Q96EX3 536 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 NOL4LQ96MY1 436 aaPredicted RBP12.88□□□□□ -0.35
SPPL3-201ENST00000353487 OR2A7Q96R45 310 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 TMEM9BQ9NQ34 198 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 OR52A1Q9UKL2 312 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 DOPEY2Q9Y3R5 2298 aa12.88□□□□□ -0.35
SPPL3-201ENST00000353487 CEP250Q9BV73 2442 aa12.87□□□□□ -0.35
SPPL3-201ENST00000353487 OR2M5A3KFT3 312 aa12.87□□□□□ -0.35
SPPL3-201ENST00000353487 C17orf105B2RV13 164 aa12.87□□□□□ -0.35
SPPL3-201ENST00000353487 K7ERU9 68 aa12.87□□□□□ -0.35
SPPL3-201ENST00000353487 METTL15P1P0C7V9 234 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms