RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 OR3A2P47893 321 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 SNU13P55769 128 aaKnown RBP21.58■■□□□ 1.05
CPNE1-202ENST00000352393 CSNK2A1P68400 391 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-202ENST00000352393 ZNF239Q16600 458 aaKnown RBP21.58■■□□□ 1.05
CPNE1-202ENST00000352393 RAB11FIP2Q7L804 512 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 RABEPKQ7Z6M1 372 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 CSNK2A3Q8NEV1 391 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 OR51T1Q8NGJ9 327 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 SAT2Q96F10 170 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-202ENST00000352393 SMIM8Q96KF7 97 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 OXGR1Q96P68 337 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 OR5B2Q96R09 309 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 SLC7A5P2Q9GIP4 190 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 TMEM231Q9H6L2 316 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 METTL8Q9H825 291 aaKnown RBP21.58■■□□□ 1.05
CPNE1-202ENST00000352393 TREM1Q9NP99 234 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 ACKR4Q9NPB9 350 aa21.58■■□□□ 1.05
CPNE1-202ENST00000352393 C5orf63A6NC05 138 aa21.58■■□□□ 1.04
CPNE1-202ENST00000352393 SDCBPO00560 298 aaPredicted RBP21.58■■□□□ 1.04
CPNE1-202ENST00000352393 SNAPINO95295 136 aa21.58■■□□□ 1.04
CPNE1-202ENST00000352393 QDPRP09417 244 aa21.58■■□□□ 1.04
CPNE1-202ENST00000352393 PVALBP20472 110 aaPredicted RBP21.58■■□□□ 1.04
CPNE1-202ENST00000352393 NKAIN1Q4KMZ8 207 aa21.58■■□□□ 1.04
CPNE1-202ENST00000352393 ST6GALNAC5Q9BVH7 336 aa21.58■■□□□ 1.04
CPNE1-202ENST00000352393 METTL7AQ9H8H3 244 aa21.58■■□□□ 1.04
CPNE1-202ENST00000352393 EHFQ9NZC4 300 aa21.58■■□□□ 1.04
CPNE1-202ENST00000352393 GHRLQ9UBU3 117 aa21.58■■□□□ 1.04
CPNE1-202ENST00000352393 PMS2P1A4D2B8 440 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 FIGNL2A6NMB9 653 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 NAT2P11245 290 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 GLRA1P23415 457 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 NPBWR1P48145 328 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 SURF2Q15527 256 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-202ENST00000352393 C1QL2Q7Z5L3 287 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 PNLDC1Q8NA58 520 aaKnown RBP21.57■■□□□ 1.04
CPNE1-202ENST00000352393 OR2M3Q8NG83 312 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 OR5L2Q8NGL0 311 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 LYZL4Q96KX0 146 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 MLXQ9UH92 298 aa21.57■■□□□ 1.04
CPNE1-202ENST00000352393 F12P00748 615 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-202ENST00000352393 CTSSP25774 331 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 PTGFRP43088 359 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 ECH1Q13011 328 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 KISS1Q15726 138 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 TMEM200AQ86VY9 491 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 FAM219AQ8IW50 185 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 SLC25A45Q8N413 288 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 EMG1Q92979 244 aaKnown RBP21.56■■□□□ 1.04
CPNE1-202ENST00000352393 PECRQ9BY49 303 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 ABCA7Q8IZY2 2146 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 KLK2P20151 261 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 ZNF84P51523 738 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 OR5D18Q8NGL1 313 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 NRIP2Q9BQI9 281 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 OR2S2Q9NQN1 319 aa21.56■■□□□ 1.04
CPNE1-202ENST00000352393 ZNF43P17038 809 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 FAM69BQ5VUD6 431 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 MAFIPQ8WZ33 124 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 LIN37Q96GY3 246 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-202ENST00000352393 AQP7P3A6NL99 342 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 TIAF1O95411 115 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 MUC1P15941 1255 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-202ENST00000352393 PTGER4P35408 488 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 THBS4P35443 961 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 TM2D1Q9BX74 207 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 RHOFQ9HBH0 211 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 RCC2Q9P258 522 aaKnown RBP21.55■■□□□ 1.04
CPNE1-202ENST00000352393 MYOTQ9UBF9 498 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 FAM96BQ9Y3D0 163 aa21.55■■□□□ 1.04
CPNE1-202ENST00000352393 EYSQ5T1H1 3165 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 NCOA6Q14686 2063 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-202ENST00000352393 SERPINE3A8MV23 424 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 BLVRBP30043 206 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-202ENST00000352393 RFC3P40938 356 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 CAV2P51636 162 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 S100A10P60903 97 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 DMRTC1Q5HYR2 192 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 SHEQ5VZ18 495 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 PGAM5Q96HS1 289 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 HRH4Q9H3N8 390 aa21.54■■□□□ 1.04
CPNE1-202ENST00000352393 TRIOO75962 3097 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 LOC102725191A0A1B0GVB3 256 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 ZNF726A6NNF4 738 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 TAAR5O14804 337 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 OR2J2O76002 312 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 HOXB5P09067 269 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 SRFP11831 508 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 EIF5AP63241 154 aaKnown RBP21.53■■□□□ 1.04
CPNE1-202ENST00000352393 RPL7L1Q6DKI1 246 aaKnown RBP21.53■■□□□ 1.04
CPNE1-202ENST00000352393 SLC16A14Q7RTX9 510 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 NPRL2Q8WTW4 380 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 SLC25A43Q8WUT9 341 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-202ENST00000352393 NECAB3Q96P71 396 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-202ENST00000352393 MEMO1Q9Y316 297 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 CA11O75493 328 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 HKR1P10072 659 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 SFTPDP35247 375 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 LPAR6P43657 344 aa21.53■■□□□ 1.04
CPNE1-202ENST00000352393 HOXA1P49639 335 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-202ENST00000352393 COL19A1Q14993 1142 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms