RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PRDX4Q13162 271 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 OR10AD1Q8NGE0 317 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 OR8B12Q8NGG6 310 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 PI4KAP42356 2102 aa12.15□□□□□ -0.46
SMC6-201ENST00000351948 HSPB2A8KAH6 182 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 AKR7A2O43488 359 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 DHRS3O75911 302 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 OR5H8P0DN80 308 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 COX6A1P12074 109 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 HSPB2Q16082 182 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 ALKAL2Q6UX46 152 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 PAQR8Q8TEZ7 354 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 SLC39A7Q92504 469 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 UBL7Q96S82 380 aaPredicted RBP12.15□□□□□ -0.47
SMC6-201ENST00000351948 SULT4A1Q9BR01 284 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 AICDAQ9GZX7 198 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 MLXQ9UH92 298 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 VWA8A3KMH1 1905 aa12.15□□□□□ -0.47
SMC6-201ENST00000351948 ZNF646O15015 1829 aaPredicted RBP12.15□□□□□ -0.47
SMC6-201ENST00000351948 PLPP2O43688 288 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 OR3A4PP47883 348 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 GNB2P62879 340 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 CSRP2Q16527 193 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 C1orf87Q8N0U7 546 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 MARCH1Q8TCQ1 289 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 MESP1Q9BRJ9 268 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 EXOGQ9Y2C4 368 aaKnown RBP12.14□□□□□ -0.47
SMC6-201ENST00000351948 AKAP6Q13023 2319 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 H7C1Q1 480 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 UPK3AO75631 287 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 TPPPO94811 219 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 SEMG1P04279 462 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 ACSM4P0C7M7 580 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 THBS4P35443 961 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 GK2Q14410 553 aaPredicted RBP12.14□□□□□ -0.47
SMC6-201ENST00000351948 ADIPOR1Q96A54 375 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 RGCCQ9H4X1 137 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 RAP2BP61225 183 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 TSPO2Q5TGU0 170 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 LPCAT3Q6P1A2 487 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 SUN5Q8TC36 379 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 TIMM8BQ9Y5J9 83 aaPredicted RBP12.14□□□□□ -0.47
SMC6-201ENST00000351948 DLL1O00548 723 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 RGS11O94810 467 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 ACTL6AO96019 429 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 KIR2DL3P43628 341 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 PPP1CBP62140 327 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 RND1Q92730 232 aa12.14□□□□□ -0.47
SMC6-201ENST00000351948 SLC25A21Q9BQT8 299 aaPredicted RBP12.14□□□□□ -0.47
SMC6-201ENST00000351948 HEYLQ9NQ87 328 aaPredicted RBP12.14□□□□□ -0.47
SMC6-201ENST00000351948 GLAP06280 429 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 GNG3P63215 75 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 TMEM108Q6UXF1 575 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 C17orf107Q6ZR85 190 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 OR10X1Q8NGY0 326 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 CHST6Q9GZX3 395 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 PCOLCEQ15113 449 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 ADPRHL1Q8NDY3 354 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 ST8SIA4Q92187 359 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
SMC6-201ENST00000351948 TGFBR3LH3BV60 316 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 MSTNO14793 375 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 GPR137BO60478 399 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 GABRA1P14867 456 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 NFYAP23511 347 aaPredicted RBP12.13□□□□□ -0.47
SMC6-201ENST00000351948 SMIM21Q3B7S5 101 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 CDONQ4KMG0 1287 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 OR8G2PQ6IF36 304 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 C19orf48Q6RUI8 117 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 OR10V1Q8NGI7 309 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 ARHGAP5-AS1Q96IT6 56 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 FYTTD1Q96QD9 318 aaKnown RBP12.13□□□□□ -0.47
SMC6-201ENST00000351948 GPR35Q9HC97 309 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 FLVCR1Q9Y5Y0 555 aa12.13□□□□□ -0.47
SMC6-201ENST00000351948 TRAV1-2A0A0B4J238 106 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 B8ZZF3 427 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 SCGB2A1O75556 95 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 CNIH1O95406 144 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 GNB1P62873 340 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 CDC20Q12834 499 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 CREB3L2Q70SY1 520 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 RFLNBQ8N5W9 214 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 HSD17B11Q8NBQ5 300 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 OR51A4Q8NGJ6 313 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 NMNAT2Q9BZQ4 307 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 HRH4Q9H3N8 390 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 FRRS1LQ9P0K9 344 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 OSGIN2Q9Y236 505 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 CHRNB4P30926 498 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 C6orf201Q7Z4U5 140 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 TGIF2Q9GZN2 237 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 NYNRINQ9P2P1 1898 aaKnown RBP12.12□□□□□ -0.47
SMC6-201ENST00000351948 DEFB108AA8MXU0 73 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 DCTN6O00399 190 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 CCL21O00585 134 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 PDLIM3Q53GG5 364 aaPredicted RBP12.12□□□□□ -0.47
SMC6-201ENST00000351948 LRRTM1Q86UE6 522 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 ZNF275Q9NSD4 429 aaPredicted RBP12.12□□□□□ -0.47
SMC6-201ENST00000351948 ATXN7O15265 892 aaPredicted RBP12.12□□□□□ -0.47
SMC6-201ENST00000351948 GPR12P47775 334 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms