RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 NECAP1Q8NC96 275 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 BSCL2Q96G97 398 aaPredicted RBP14.32□□□□□ -0.12
PTPN11-201ENST00000351677 TAAR9Q96RI9 348 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 KCNK15Q9H427 330 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 FSCN3Q9NQT6 498 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 FLRT3Q9NZU0 649 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 HRKO00198 91 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 PLPP3O14495 311 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 GSK3AP49840 483 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 C11orf87Q6NUJ2 197 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 ZNF439Q8NDP4 499 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 OR5M9Q8NGP3 310 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 ABHD1Q96SE0 405 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 PSENENQ9NZ42 101 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 ATG2BQ96BY7 2078 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 F6UZH7 168 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 H3BP45 60 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 HNF1AP20823 631 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 LSM11P83369 360 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPN11-201ENST00000351677 EIF4EBP2Q13542 120 aaPredicted RBP14.32□□□□□ -0.12
PTPN11-201ENST00000351677 TMEM88Q6PEY1 159 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 FN3KRPQ9HA64 309 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 BTBD17A6NE02 478 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 NUDT19A8MXV4 375 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 TERTO14746 1132 aaKnown RBP14.32□□□□□ -0.12
PTPN11-201ENST00000351677 PPP1R2P9O14990 202 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 CLN5O75503 358 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 OR10J4P0C629 311 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 RAB1AP62820 205 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 CDONQ4KMG0 1287 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 MRM1Q6IN84 353 aaKnown RBP14.32□□□□□ -0.12
PTPN11-201ENST00000351677 CDC20BQ86Y33 519 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 OR10P1Q8NGE3 313 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 OR5AP2Q8NGF4 316 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 UBALD1Q8TB05 177 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 PCED1AQ9H1Q7 454 aa14.32□□□□□ -0.12
PTPN11-201ENST00000351677 STRAPQ9Y3F4 350 aaKnown RBP14.32□□□□□ -0.12
PTPN11-201ENST00000351677 KIF13BQ9NQT8 1826 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 WISP3O95389 354 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 DEFA6Q01524 100 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 CD226Q15762 336 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 ZNF239Q16600 458 aaKnown RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 HIST2H3AQ71DI3 136 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 CISD2Q8N5K1 135 aaKnown RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 ADAM19Q9H013 955 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 C1orf53Q5VUE5 145 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 ADPRHL1Q8NDY3 354 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 OR1J1Q8NGS3 322 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 EXTL1Q92935 676 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 TMPRSS13Q9BYE2 586 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 MTFP1Q9UDX5 166 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 TRIP12Q14669 1992 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 C1QL3Q5VWW1 255 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 C1orf87Q8N0U7 546 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 OR4F5Q8NH21 305 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 OR4F4Q96R69 305 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 ZPBPQ9BS86 351 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 COL11A2P13942 1736 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 TXNDC12O95881 172 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 EMP3P54852 163 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 NXPH1P58417 271 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 PSG6Q00889 435 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 ZNF718Q3SXZ3 478 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 MUC20Q8N307 709 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 OR10X1Q8NGY0 326 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 CMTM2Q8TAZ6 248 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 ABCD4O14678 606 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 OR3A4PP47883 348 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 ZNF816Q0VGE8 651 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 FUT7Q11130 342 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 ZNF774Q6NX45 483 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 CXorf67Q86X51 503 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 RXFP4Q8TDU9 374 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 APOBEC3DQ96AK3 386 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-201ENST00000351677 P4HTMQ9NXG6 502 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 MTCH2Q9Y6C9 303 aa14.31□□□□□ -0.12
PTPN11-201ENST00000351677 RFPL4AA6NLU0 287 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 RFPL4AL1F8VTS6 287 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 CD37P11049 281 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 CD96P40200 585 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 ZAR1Q86SH2 424 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 ARRDC1Q8N5I2 433 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 OR11G2Q8NGC1 345 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 DLL4Q9NR61 685 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 PWWP2BQ6NUJ5 590 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.3□□□□□ -0.12
PTPN11-201ENST00000351677 MRPL22Q9NWU5 206 aaKnown RBP14.3□□□□□ -0.12
PTPN11-201ENST00000351677 A0A1W2PPH5 198 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 A0A1W2PR80 420 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 GSG1Q2KHT4 349 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 SLC38A6Q8IZM9 456 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 LHX4Q969G2 390 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 RPUSD4Q96CM3 377 aaKnown RBP14.3□□□□□ -0.12
PTPN11-201ENST00000351677 MRM2Q9UI43 246 aaKnown RBP14.3□□□□□ -0.12
PTPN11-201ENST00000351677 RAB35Q15286 201 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 SPRED2Q7Z698 418 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 FAM173AQ9BQD7 235 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 SLC17A5Q9NRA2 495 aa14.3□□□□□ -0.12
PTPN11-201ENST00000351677 OR5H15A6NDH6 313 aa14.29□□□□□ -0.12
PTPN11-201ENST00000351677 HIST1H1DP16402 221 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms