RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 C14orf28Q4W4Y0 310 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 COX15Q7KZN9 410 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 JSRP1Q96MG2 331 aaPredicted RBP16.52■□□□□ 0.23
SCARF1-202ENST00000348987 PCDH15Q96QU1 1955 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 ASXL3Q9C0F0 2248 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 C17orf105B2RV13 164 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 TERTO14746 1132 aaKnown RBP16.51■□□□□ 0.23
SCARF1-202ENST00000348987 DDTP30046 118 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 ZNF84P51523 738 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 FNDC7Q5VTL7 733 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 PNLDC1Q8NA58 520 aaKnown RBP16.51■□□□□ 0.23
SCARF1-202ENST00000348987 TPSD1Q9BZJ3 242 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 SLC35B3Q9H1N7 401 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 ZDHHC8Q9ULC8 765 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 DMDP11532 3685 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 ZNF727A8MUV8 499 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 MPZL1O95297 269 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 DRD1P21728 446 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 GFERP55789 205 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 MRPS21P82921 87 aaKnown RBP16.51■□□□□ 0.23
SCARF1-202ENST00000348987 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCARF1-202ENST00000348987 HIST2H3AQ71DI3 136 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 FGGYQ96C11 551 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 SSX3Q99909 188 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 CNTNAP3Q9BZ76 1288 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 GPR61Q9BZJ8 451 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 SLC5A6Q9Y289 635 aa16.51■□□□□ 0.23
SCARF1-202ENST00000348987 A0A087X0M5 115 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 A0A1B0GX30 115 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 P2RY10O00398 339 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 GNALP38405 381 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 RAB1AP62820 205 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 QRFPP83859 136 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 ZNF674Q2M3X9 581 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 BEND4Q6ZU67 534 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 NKAIN3Q8N8D7 197 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 ERGIC1Q969X5 290 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 TCTN2Q96GX1 697 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 ADOQ96SZ5 270 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 PNO1Q9NRX1 252 aaKnown RBP16.5■□□□□ 0.23
SCARF1-202ENST00000348987 COL4A2P08572 1712 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 F10P00742 488 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 GAPDHP04406 335 aaKnown RBP16.5■□□□□ 0.23
SCARF1-202ENST00000348987 CAMLGP49069 296 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 IAH1Q2TAA2 248 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-202ENST00000348987 LCN10Q6JVE6 187 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 RPUSD3Q6P087 351 aaKnown RBP16.5■□□□□ 0.23
SCARF1-202ENST00000348987 MAMDC2Q7Z304 686 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-202ENST00000348987 PTPMT1Q8WUK0 201 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-202ENST00000348987 OR8D2Q9GZM6 311 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 UBQLN4Q9NRR5 601 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 MUC3AQ02505 3323 aa16.5■□□□□ 0.23
SCARF1-202ENST00000348987 BTBD17A6NE02 478 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 RAMP1O60894 148 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 ZNF217O75362 1048 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 NSA2O95478 260 aaKnown RBP16.49■□□□□ 0.23
SCARF1-202ENST00000348987 CTLA4P16410 223 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 UCP2P55851 309 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 LSM6P62312 80 aaKnown RBP16.49■□□□□ 0.23
SCARF1-202ENST00000348987 ZNF343Q6P1L6 599 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 KDM8Q8N371 416 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-202ENST00000348987 S100A13Q99584 98 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 UCK1Q9HA47 277 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 OR52A1Q9UKL2 312 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 COL6A3P12111 3177 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 IGHV5-51A0A0C4DH38 117 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 SDCBPO00560 298 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-202ENST00000348987 SOD3P08294 240 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 DANCRP0C864 163 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 INSM1Q01101 510 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-202ENST00000348987 RNF144BQ7Z419 303 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 COMMD1Q8N668 190 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 METTL21AQ8WXB1 218 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 TSLPQ969D9 159 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 MUCL1Q96DR8 90 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 BSCL2Q96G97 398 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-202ENST00000348987 G6PC2Q9NQR9 355 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 R4GMQ9 66 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 PRSS37A4D1T9 235 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 UTS2O95399 124 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 KNG1P01042 644 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 FPR2P25090 351 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 OR1D4P47884 311 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 EMP2P54851 167 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 SLC37A1P57057 533 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 OPN5Q6U736 354 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 NTNG2Q96CW9 530 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 MISP3Q96FF7 219 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 SMOC1Q9H4F8 434 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 DCAF16Q9NXF7 216 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 MEMO1Q9Y316 297 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 LSM5Q9Y4Y9 91 aaKnown RBP16.49■□□□□ 0.23
SCARF1-202ENST00000348987 URGCP-MRPS24S4R325 110 aa16.49■□□□□ 0.23
SCARF1-202ENST00000348987 PCNX3Q9H6A9 2034 aa16.48■□□□□ 0.23
SCARF1-202ENST00000348987 ZNF726A6NNF4 738 aa16.48■□□□□ 0.23
SCARF1-202ENST00000348987 C10orf142B7Z368 130 aa16.48■□□□□ 0.23
SCARF1-202ENST00000348987 BCAT2O15382 392 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-202ENST00000348987 HIST1H2BKO60814 126 aa16.48■□□□□ 0.23
SCARF1-202ENST00000348987 SRSF10O75494 262 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms