RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ZMYND11Q15326 602 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 C4orf46Q504U0 113 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 ZNF767PQ75MW2 155 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 C1QL2Q7Z5L3 287 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 RTN4RL2Q86UN3 420 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 FAM89BQ8N5H3 189 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 OR5D18Q8NGL1 313 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 OR13C8Q8NGS7 320 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 OR2AE1Q8NHA4 323 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 RADILQ96JH8 1075 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 ZNF391Q9UJN7 358 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 MMP7P09237 267 aaPredicted RBP17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 ACKR3P25106 362 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 RIPPLY1Q0D2K3 151 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 STK11Q15831 433 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 PNLIPRP3Q17RR3 467 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 SCGB2B2Q4G0G5 96 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 OR52W1Q6IF63 320 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 CD163Q86VB7 1156 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 FAM109AQ8N4B1 249 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 OR2AK2Q8NG84 335 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 TNFAIP8L1Q8WVP5 186 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 FAM86C1Q9NVL1 165 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 SLC23A1Q9UHI7 598 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 PLEKHA6Q9Y2H5 1048 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 CDRT15L2A8MXV6 281 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 TOXO94900 526 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 OR4E1P0C645 316 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 NUBP1P53384 320 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 PPIAP62937 165 aaKnown RBP17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 CXADRP78310 365 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 NKPD1Q17RQ9 610 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 LGALSLQ3ZCW2 172 aaPredicted RBP17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 ATPAF1Q5TC12 328 aaPredicted RBP17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 TUSC5Q8IXB3 177 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 SLC7A10Q9NS82 523 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 EIF3KQ9UBQ5 218 aaKnown RBP17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 ANAPC10Q9UM13 185 aa17.75■□□□□ 0.43
CHRNA3-202ENST00000348639 OR6C65A6NJZ3 312 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 RPL36A-HNRNPH2H7BZ11 118 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 LRP3O75074 770 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 CSN2P05814 226 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 TPOP07202 933 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 CD46P15529 392 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 ARG2P78540 354 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 SRSF6Q13247 344 aaKnown RBP17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 ZFP62Q8NB50 900 aaPredicted RBP17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 OR51T1Q8NGJ9 327 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 PIGTQ969N2 578 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 SPSB1Q96BD6 273 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 RGCCQ9H4X1 137 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 RNF122Q9H9V4 155 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 BCO1Q9HAY6 547 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 ZNF724A8MTY0 619 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 MFNGO00587 321 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 MGMTP16455 207 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 NAT1P18440 290 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 HRH1P35367 487 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 TMED4Q7Z7H5 227 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 STEAP2Q8NFT2 490 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 FNDC9Q8TBE3 224 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 S100A13Q99584 98 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 ACKR4Q9NPB9 350 aa17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.74■□□□□ 0.43
CHRNA3-202ENST00000348639 H3BUI4 141 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 TSC22D2O75157 780 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 ZNF24P17028 368 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 SOX8P57073 446 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 TCF15Q12870 199 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 SNAPC3Q92966 411 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 ARHGAP5-AS1Q96IT6 56 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 TM2D1Q9BX74 207 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 PRRG4Q9BZD6 226 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 CALHM2Q9HA72 323 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 GPR173Q9NS66 373 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 ZNF407Q9C0G0 2248 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 LOC400499M0QZD8 3231 aa17.73■□□□□ 0.43
CHRNA3-202ENST00000348639 FOXI3A8MTJ6 420 aaPredicted RBP17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 NKX2-8O15522 239 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 ACTL6AO96019 429 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 H2BFSP57053 126 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 TSPAN5P62079 268 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 ARF1P84077 181 aaKnown RBP17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 DHODHQ02127 395 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 SLC10A1Q14973 349 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 MPPED2Q15777 294 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 C3AR1Q16581 482 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 C2orf68Q2NKX9 166 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 PABPC1L2AQ5JQF8 200 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 UXS1Q8NBZ7 420 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 OCSTAMPQ9BR26 566 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 ATPIF1Q9UII2 106 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 DNAJC13O75165 2243 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 CUL9Q8IWT3 2517 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 RAD51DO75771 328 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 SERPINA2P20848 420 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 RRADP55042 308 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 PER3P56645 1201 aa17.72■□□□□ 0.43
CHRNA3-202ENST00000348639 UBE2MP61081 183 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms