RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 RTTNQ86VV8 2226 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 A0A1W2PP55 124 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 OTOL1A6NHN0 477 aaPredicted RBP13.6□□□□□ -0.23
LMNA-201ENST00000347559 CDRT15L2A8MXV6 281 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 PTBP3O95758 552 aaKnown RBP13.6□□□□□ -0.23
LMNA-201ENST00000347559 IFNA21P01568 189 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 FCARP24071 287 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 GJA4P35212 333 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 PTGER4P35408 488 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 MAS1LP35410 378 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 DRD3P35462 400 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 ZNF93P35789 620 aaPredicted RBP13.6□□□□□ -0.23
LMNA-201ENST00000347559 DHPSP49366 369 aaPredicted RBP13.6□□□□□ -0.23
LMNA-201ENST00000347559 AADACL3Q5VUY0 350 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 SNX22Q96L94 193 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 G6PC2Q9NQR9 355 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 FAM86C1Q9NVL1 165 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 C1orf123Q9NWV4 160 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 B3GALT5Q9Y2C3 310 aa13.6□□□□□ -0.23
LMNA-201ENST00000347559 SLC31A1O15431 190 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 SYT7O43581 403 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 SOX15O60248 233 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 BPNT1O95861 308 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 SEC11BP0C7V7 166 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 ZNF823P16415 610 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 BCKDHBP21953 392 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 RNF4P78317 190 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 C16orf52Q8NHV5 167 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 MVB12AQ96EY5 273 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 LPAR5Q9H1C0 372 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 KIR3DX1Q9H7L2 352 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 BCO1Q9HAY6 547 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 FGF22Q9HCT0 170 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 RHBDD3Q9Y3P4 386 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 NOTCH4Q99466 2003 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 RPS2P15880 293 aaKnown RBP13.59□□□□□ -0.23
LMNA-201ENST00000347559 SNU13P55769 128 aaKnown RBP13.59□□□□□ -0.23
LMNA-201ENST00000347559 QRFPP83859 136 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 PCK2Q16822 640 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 SP6Q3SY56 376 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 VAX1Q5SQQ9 334 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 TCEAL6Q6IPX3 200 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 RSC1A1Q92681 617 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 CCDC3Q9BQI4 270 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 A0A1B0GWJ7 208 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 CRTAPO75718 401 aaPredicted RBP13.59□□□□□ -0.23
LMNA-201ENST00000347559 HIST1H1DP16402 221 aaKnown RBP13.59□□□□□ -0.23
LMNA-201ENST00000347559 LILRA6Q6PI73 481 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 ABHD5Q8WTS1 349 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 ABHD14AQ9BUJ0 271 aa13.59□□□□□ -0.23
LMNA-201ENST00000347559 ZNF878C9JN71 531 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 FOXS1O43638 330 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 CTSBP07858 339 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 H2BFMP0C1H6 154 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 NHLH2Q02577 135 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 FMODQ06828 376 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 AGBL4Q5VU57 503 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 CDCP2Q5VXM1 449 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 ZNF429Q86V71 674 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 LYPD6Q86Y78 171 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 SLC22A18Q96BI1 424 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 MRPL37Q9BZE1 423 aaKnown RBP13.58□□□□□ -0.24
LMNA-201ENST00000347559 ZNF701Q9NV72 531 aaPredicted RBP13.58□□□□□ -0.24
LMNA-201ENST00000347559 MRPS28Q9Y2Q9 187 aaKnown RBP13.58□□□□□ -0.24
LMNA-201ENST00000347559 IGLV1-36A0A0B4J1U3 117 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 TGFBR3LH3BV60 316 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 ADAM10O14672 748 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 GEMIN2O14893 280 aaKnown RBP13.58□□□□□ -0.24
LMNA-201ENST00000347559 TMEM50BP56557 158 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 RPL27P61353 136 aaKnown RBP13.58□□□□□ -0.24
LMNA-201ENST00000347559 GLO1Q04760 184 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 P4HA3Q7Z4N8 544 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 GRASPQ7Z6J2 395 aaPredicted RBP13.58□□□□□ -0.24
LMNA-201ENST00000347559 PRR22Q8IZ63 422 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 ZFP62Q8NB50 900 aaPredicted RBP13.58□□□□□ -0.24
LMNA-201ENST00000347559 REEP6Q96HR9 211 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 GPER1Q99527 375 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 PRODH2Q9UF12 536 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 TP53TG5Q9Y2B4 290 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 LIPGQ9Y5X9 500 aa13.58□□□□□ -0.24
LMNA-201ENST00000347559 ELOA3CA0A087WX78 387 aaPredicted RBP13.57□□□□□ -0.24
LMNA-201ENST00000347559 CLDN4O14493 209 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 EREGO14944 169 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 LILRB3O75022 631 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 WISP1O95388 367 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 PGA4P0DJD7 388 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 PGA5P0DJD9 388 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 CSF2RAP15509 400 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 HSD11B1P28845 292 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 APLNRP35414 380 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 APOBEC1P41238 236 aaKnown RBP13.57□□□□□ -0.24
LMNA-201ENST00000347559 OR3A4PP47883 348 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 C1orf140Q5VVS0 124 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 OR5D18Q8NGL1 313 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 HIST1H2BLQ99880 126 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 HDAC8Q9BY41 377 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 KCNIP3Q9Y2W7 256 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 TMED3Q9Y3Q3 217 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 RBFOX3A6NFN3 312 aa13.57□□□□□ -0.24
LMNA-201ENST00000347559 FIGNL2A6NMB9 653 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms