RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 RPS10P5Q9NQ39 176 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 UBQLN4Q9NRR5 601 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 TNFSF18Q9UNG2 199 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 BSNQ9UPA5 3926 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 A0A1W2PNV4 684 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 DVL1O14640 695 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 P2RX6O15547 441 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF354AO60765 605 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 NDUFB6O95139 128 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 CD8AP01732 235 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 CD74P04233 296 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 EFNA3P52797 238 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 NDUFA6P56556 154 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 SLC37A1P57057 533 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 B3GALT5-AS1P59052 145 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 TBPL1P62380 186 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 ARF1P84077 181 aaKnown RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 EFNB1P98172 346 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 SRSF4Q08170 494 aaKnown RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 GINS1Q14691 196 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 HEPACAMQ14CZ8 416 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 RAB35Q15286 201 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 XKR6Q5GH73 641 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 OR2G6Q5TZ20 316 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 TRIM40Q6P9F5 258 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 DRAM2Q6UX65 266 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 IL20RBQ6UXL0 311 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 DCXRQ7Z4W1 244 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 UBE3DQ7Z6J8 389 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 PXKQ7Z7A4 578 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 GCNT2Q8N0V5 402 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 GTPBP8Q8N3Z3 284 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 BPIFB2Q8N4F0 458 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 STAG3L4Q8TBR4 150 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 NPRL2Q8WTW4 380 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 TPD52L3Q96J77 140 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 WFIKKN1Q96NZ8 548 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF2Q9BSG1 426 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM231Q9H6L2 316 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM185BQ9H7F4 350 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 MEPEQ9NQ76 525 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 EXOSC1Q9Y3B2 195 aaKnown RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 KPTNQ9Y664 436 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 LOC102725191A0A1B0GVB3 256 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM269A0A1B0GVZ9 245 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 UBE2QL1A1L167 161 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 C7orf77A4D0Y5 90 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 GGT3PA6NGU5 568 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 A6NIN4 97 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 SUPT3HB4E1H0 165 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF587BE7ETH6 402 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 RNASEK-C17orf49H0YIS7 233 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 CA11O75493 328 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 GPR75O95800 540 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 SOD3P08294 240 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 EPHA1P21709 976 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 HTR2CP28335 458 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 PTGDSP41222 190 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 LIM2P55344 173 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 SPIBQ01892 262 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 RAB40BQ12829 278 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 EBPQ15125 230 aaKnown RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 ACTBL2Q562R1 376 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 P4HA3Q7Z4N8 544 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 OR5T1Q8NG75 326 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 TERB2Q8NHR7 220 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 RNF141Q8WVD5 230 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 NUDCD2Q8WVJ2 157 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 APIPQ96GX9 242 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 ADGRG7Q96K78 797 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 CNN2Q99439 309 aaKnown RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 BHLHE41Q9C0J9 482 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 WWTR1Q9GZV5 400 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 NMNAT1Q9HAN9 279 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-202ENST00000343599 RHOFQ9HBH0 211 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 RASD1Q9Y272 281 aa6.41□□□□□ -1.38
ZNF540-202ENST00000343599 CFAP46Q8IYW2 2715 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 A0A1B0GTH9 108 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 F8VVB4 439 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 F8VWA3 439 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 GOSR2O14653 212 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 PPP1R2P9O14990 202 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 TNFSF13O75888 250 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 F13BP05160 661 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 LHX2P50458 406 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 CDH12P55289 794 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 SFXN4Q6P4A7 337 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 LINGO2Q7L985 606 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 KRTCAP2Q8N6L1 136 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 OR9A4Q8NGU2 314 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 FAM216AQ8WUB2 273 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 NEU4Q8WWR8 484 aaPredicted RBP6.4□□□□□ -1.38
ZNF540-202ENST00000343599 OR14A2Q96R54 314 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF426Q9BUY5 554 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 ACER3Q9NUN7 267 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 TAS2R10Q9NYW0 307 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 FAM96BQ9Y3D0 163 aa6.4□□□□□ -1.38
ZNF540-202ENST00000343599 POMT1Q9Y6A1 747 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms