RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 OR5C1Q8NGR4 320 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 RAB40CQ96S21 281 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SRD5A3Q9H8P0 318 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 TREM2Q9NZC2 230 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SLCO3A1Q9UIG8 710 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 DHRS7CA6NNS2 312 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 COCHO43405 550 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 CD1BP29016 333 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 RPS21P63220 83 aaKnown RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 MEF2AQ02078 507 aaPredicted RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 EGR3Q06889 387 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 MRPL2Q5T653 305 aaKnown RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 TMEM116Q8NCL8 245 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 MYOZ3Q8TDC0 251 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SLC38A5Q8WUX1 472 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 RPEQ96AT9 228 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 KIAA1456Q9P272 454 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 MCTS1Q9ULC4 181 aaKnown RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 CORINQ9Y5Q5 1042 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 NHSQ6T4R5 1651 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 KDM4EB2RXH2 506 aaPredicted RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 B4DGG1 531 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 FOXE1O00358 373 aaPredicted RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 ZNF217O75362 1048 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 MT-ND6P03923 174 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SPNP16150 400 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ZNF157P51786 506 aaPredicted RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 C21orf58P58505 322 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 HLA-DRB3P79483 266 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 OR8B8Q15620 311 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 NNATQ16517 81 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ZNF776Q68DI1 518 aaPredicted RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 ASCL4Q6XD76 172 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SAMD7Q7Z3H4 446 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 C9orf62Q8N4C0 152 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SLC35A4Q96G79 324 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 FAM234AQ9H0X4 552 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 STARD10Q9Y365 291 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 P04436 131 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 MPC1LP0DKB6 136 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 DHRS2Q13268 280 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 TWIST1Q15672 202 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 GSG1Q2KHT4 349 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 KHDC3LQ587J8 217 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ARSIQ5FYB1 569 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 MRM1Q6IN84 353 aaKnown RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 CBLL1Q75N03 491 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 C4orf32Q8N8J7 132 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ROBO4Q8WZ75 1007 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 NEIL1Q96FI4 390 aaPredicted RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 RNF2Q99496 336 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 NDRG4Q9ULP0 352 aaKnown RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 SLC45A2Q9UMX9 530 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 LOC390937A0A1W2PQ73 354 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 CDK2AP1O14519 115 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 LYZL6O75951 148 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SHC1P29353 583 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 RIGQ13278 110 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SYPL2Q5VXT5 272 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 KLHDC8AQ8IYD2 350 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 NXPE3Q969Y0 559 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 MOB4Q9Y3A3 225 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 H7C2G1 150 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SLC25A17O43808 307 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 CASP6P55212 293 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 LSM11P83369 360 aaKnown RBP eCLIP5.61□□□□□ -1.51
VCAN-203ENST00000343200 FAM26DQ5JW98 314 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ACVR1CQ8NER5 493 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 CLEC4CQ8WTT0 213 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 YIPF6Q96EC8 236 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ZIC5Q96T25 663 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 BCO2Q9BYV7 579 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 CHST8Q9H2A9 424 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SPHK2Q9NRA0 654 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SETD2Q9BYW2 2564 aaPredicted RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 TCRBV21S2A2A0A5A6 115 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TCRBV16S1A1N1A0A5B0 115 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 CYB5R3P00387 301 aaPredicted RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 ARG1P05089 322 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 HINT1P49773 126 aaPredicted RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 POU3F1Q03052 451 aaPredicted RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 PWWP2BQ6NUJ5 590 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TBC1D26Q86UD7 250 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 D2HGDHQ8N465 521 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ARRDC1Q8N5I2 433 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 RNF133Q8WVZ7 376 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 PIGCQ92535 297 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 RTP4Q96DX8 246 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ZNF430Q9H8G1 570 aaPredicted RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 A4GALTQ9NPC4 353 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ANXA10Q9UJ72 324 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 TINAGQ9UJW2 476 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 COX11Q9Y6N1 276 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 PYCARD-AS1I3L0S3 204 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 ADAP1O75689 374 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 S1PR4O95977 384 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 EPHA8P29322 1005 aaPredicted RBP5.6□□□□□ -1.51
VCAN-203ENST00000343200 THBS4P35443 961 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 SRYQ05066 204 aa5.6□□□□□ -1.51
VCAN-203ENST00000343200 PLPPR5Q32ZL2 321 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms