RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 BCL9LQ86UU0 1499 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 TMEM30CPA0ZSE6 113 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 SOX15O60248 233 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 SPNS3Q6ZMD2 512 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 LKAAEAR1Q8TD35 194 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 SCN11AQ9UI33 1791 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 CYBAP13498 195 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 OR6S1Q8NH40 331 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 TOE1Q96GM8 510 aaKnown RBP16.01■□□□□ 0.15
SMAD4-201ENST00000342988 CA2P00918 260 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 T-ENOLP0DO92 83 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 ST6GAL1P15907 406 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 TXNRD3NBQ6F5E7 133 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 SYT8Q8NBV8 401 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 HHIPQ96QV1 700 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 UQCC1Q9NVA1 299 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 IFITM10A6NMD0 228 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 OR10J1P30954 320 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 ID1P41134 155 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 C12orf54Q6X4T0 127 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 TAS2R4Q9NYW5 299 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 CES1P1Q9UKY3 287 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 P01737 135 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 OR5AU1Q8NGC0 362 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 OR8A1Q8NGG7 326 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.01■□□□□ 0.15
SMAD4-201ENST00000342988 GPR45Q9Y5Y3 372 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 H7C1C5 153 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 CLDN34H7C241 214 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 CTSLP07711 333 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 RPL27P61353 136 aaKnown RBP16.01■□□□□ 0.15
SMAD4-201ENST00000342988 LRRC26Q2I0M4 334 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 C1orf140Q5VVS0 124 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 MMP24Q9Y5R2 645 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 OR1B1Q8NGR6 318 aa16.01■□□□□ 0.15
SMAD4-201ENST00000342988 PCNPQ8WW12 178 aaKnown RBP16.01■□□□□ 0.15
SMAD4-201ENST00000342988 SDCBPO00560 298 aaPredicted RBP16■□□□□ 0.15
SMAD4-201ENST00000342988 PGA4P0DJD7 388 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 PGA5P0DJD9 388 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 EXD3Q8N9H8 876 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 PPP1R1CQ8WVI7 109 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 TIMP4Q99727 224 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 A0A087WV62 115 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 WDR13Q9H1Z4 485 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 CHST8Q9H2A9 424 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 PIPOXQ9P0Z9 390 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 HDAC8Q9BY41 377 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 SLCO2B1O94956 709 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 TCEAL1Q15170 157 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 SIGIRRQ6IA17 410 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 NPIPB6E9PJ23 425 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 M0R135 149 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 NPEPL1Q8NDH3 523 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 TRMT61AQ96FX7 289 aaKnown RBP16■□□□□ 0.15
SMAD4-201ENST00000342988 ZNF799Q96GE5 643 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 UNCXA6NJT0 531 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 PIPP12273 146 aaPredicted RBP16■□□□□ 0.15
SMAD4-201ENST00000342988 TMEM128Q5BJH2 165 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 SPNS1Q9H2V7 528 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 TRIOBPQ9H2D6 2365 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 CELF2-AS1Q8N7Q2 184 aa16■□□□□ 0.15
SMAD4-201ENST00000342988 ZNF775Q96BV0 537 aaPredicted RBP16■□□□□ 0.15
SMAD4-201ENST00000342988 SELENOFO60613 162 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 CAMPP49913 170 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 AQP6Q13520 282 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 IL22RA2Q969J5 263 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 ADTRPQ96IZ2 230 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 H7C2G1 150 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 GPX3P22352 226 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 LINC00696Q6ZRV3 163 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 UBALD2Q8IYN6 164 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 MYOZ1Q9NP98 299 aaPredicted RBP15.99■□□□□ 0.15
SMAD4-201ENST00000342988 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.99■□□□□ 0.15
SMAD4-201ENST00000342988 ZNF142P52746 1687 aaPredicted RBP15.99■□□□□ 0.15
SMAD4-201ENST00000342988 FBLL1A6NHQ2 334 aaKnown RBP15.99■□□□□ 0.15
SMAD4-201ENST00000342988 STARD4Q96DR4 205 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 GPR87Q9BY21 358 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.99■□□□□ 0.15
SMAD4-201ENST00000342988 HOXC11O43248 304 aaPredicted RBP15.99■□□□□ 0.15
SMAD4-201ENST00000342988 OR2J2O76002 312 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 HSD17B10Q99714 261 aaKnown RBP15.99■□□□□ 0.15
SMAD4-201ENST00000342988 CNTD2Q9H8S5 307 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 IL17BQ9UHF5 180 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 TMED3Q9Y3Q3 217 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 DOCK3Q8IZD9 2030 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 BCL9O00512 1426 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 TLCD2A6NGC4 264 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 H0YGG7 62 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 HCRTR1O43613 425 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 INHBCP55103 352 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 GGTA1PQ4G0N0 100 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 PLPP6Q8IY26 295 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 IL36GQ9NZH8 169 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 GBF1Q92538 1859 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 HOXC5Q00444 222 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 KHDC3LQ587J8 217 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 APCDD1Q8J025 514 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 SLC5A6Q9Y289 635 aa15.99■□□□□ 0.15
SMAD4-201ENST00000342988 RGPD2P0DJD1 1756 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms