RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 IGSF11Q5DX21 431 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 ADAM5Q6NVV9 412 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 ACOT7LQ6ZUV0 252 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 ANKRD37Q7Z713 158 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 MISPQ8IVT2 679 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 SULF2Q8IWU5 870 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 EXD3Q8N9H8 876 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 OR52H1Q8NGJ2 320 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
LMX1A-202ENST00000342310 C14orf79Q96F83 325 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 MAGT1Q9H0U3 335 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 ZCCHC4Q9H5U6 513 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 MYOTQ9UBF9 498 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 DXOO77932 396 aaKnown RBP11.1□□□□□ -0.63
LMX1A-202ENST00000342310 CNR1P21554 472 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
LMX1A-202ENST00000342310 KISS1Q15726 138 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 KCNG3Q8TAE7 436 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 SLC22A8Q8TCC7 542 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 IL1F10Q8WWZ1 152 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 DNTTIP1Q9H147 329 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 G6PC2Q9NQR9 355 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 OR5AC2Q9NZP5 309 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 CACNA1BQ00975 2339 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 A0A0D9SG52 128 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 IFNA21P01568 189 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 HTR5AP47898 357 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 ACY1Q03154 408 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 LY6G6FQ5SQ64 297 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 TMEM229BQ8NBD8 167 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 TERB2Q8NHR7 220 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 CNTNAP3BQ96NU0 1288 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 LOC400499M0QZD8 3231 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 OR6C76A6NM76 312 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 TP53I11O14683 189 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 C1QL1O75973 258 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 TPT1P13693 172 aaKnown RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 NXPH1P58417 271 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 RPS27AP62979 156 aaKnown RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 UBA52P62987 128 aaKnown RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 SRSF3P84103 164 aaKnown RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 IKZF1Q13422 519 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 PAN3Q58A45 887 aaKnown RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 RPL7L1Q6DKI1 246 aaKnown RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 DRAM2Q6UX65 266 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 SLC43A2Q8N370 569 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 NECAB3Q96P71 396 aaPredicted RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF581Q9P0T4 197 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 C9J4A7 227 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 EFNA2O43921 213 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 SRFP11831 508 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 APOBEC1P41238 236 aaKnown RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 CLEC18BQ6UXF7 455 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 PUSL1Q8N0Z8 303 aaKnown RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 APCDD1LQ8NCL9 501 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 OR10Z1Q8NGY1 313 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF501Q96CX3 271 aaPredicted RBP11.09□□□□□ -0.63
LMX1A-202ENST00000342310 BORCS8Q96FH0 119 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 CCDC74BQ96LY2 380 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 URGCP-MRPS24S4R325 110 aa11.09□□□□□ -0.63
LMX1A-202ENST00000342310 TRBV23-1A0A0A0MS06 115 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 LIPT2A6NK58 231 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 OR2A4O95047 310 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 NOVA1P51513 510 aaKnown RBP11.08□□□□□ -0.64
LMX1A-202ENST00000342310 FNDC7Q5VTL7 733 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 SVBPQ8N300 66 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 ST7LQ8TDW4 575 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 THRSPQ92748 146 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 OR2A7Q96R45 310 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 RASL10BQ96S79 203 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 LHFPL6Q9Y693 200 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 DOCK11Q5JSL3 2073 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 TRIM77I1YAP6 450 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 M0R135 149 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 SECTM1Q8WVN6 248 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 ZNF799Q96GE5 643 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 EMC3Q9P0I2 261 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 SRPK3Q9UPE1 567 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 B3GALT5Q9Y2C3 310 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 ZNF98A6NK75 572 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 TTLL8A6PVC2 850 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 H3BP45 60 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 CXCL13O43927 109 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 CCL3P10147 92 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 ZNF774Q6NX45 483 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 MOB3CQ70IA8 216 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 BAP18Q8IXM2 172 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 FNDC9Q8TBE3 224 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 ARL11Q969Q4 196 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 CRLF2Q9HC73 371 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 WIF1Q9Y5W5 379 aa11.08□□□□□ -0.64
LMX1A-202ENST00000342310 BLACEA4D250 179 aa11.07□□□□□ -0.64
LMX1A-202ENST00000342310 RAD51DO75771 328 aa11.07□□□□□ -0.64
LMX1A-202ENST00000342310 IGLV3-21P80748 117 aaPredicted RBP11.07□□□□□ -0.64
LMX1A-202ENST00000342310 SMAD4Q13485 552 aaKnown RBP11.07□□□□□ -0.64
LMX1A-202ENST00000342310 OR2A2Q6IF42 318 aa11.07□□□□□ -0.64
LMX1A-202ENST00000342310 NAXDQ8IW45 347 aa11.07□□□□□ -0.64
LMX1A-202ENST00000342310 NKAIN3Q8N8D7 197 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms