RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TCEANCQ8N8B7 351 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 RAB40AQ8WXH6 277 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR8B4Q96RC9 309 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 CIB1Q99828 191 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 RTL8AQ9BWD3 113 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 GABARAPL3Q9BY60 117 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 MOB1AQ9H8S9 216 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 BRD7Q9NPI1 651 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 MMP26Q9NRE1 261 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 C1orf123Q9NWV4 160 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZNF319Q9P2F9 582 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 OAZ3Q9UMX2 235 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 KLHDC2Q9Y2U9 406 aa11.14□□□□□ -0.63
SIRPB3P-201ENST00000340424 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 TMEM269A0A1B0GVZ9 245 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 hCG_1807616A0A1W2PRN6 198 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 LHBP01229 141 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 GRPP07492 148 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 MRPL3P09001 348 aaKnown RBP11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 MUC1P15941 1255 aaPredicted RBP11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 RIDAP52758 137 aaKnown RBP11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 HILS1P60008 231 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 PAX2Q02962 417 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 PAX8Q06710 450 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 EGR3Q06889 387 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 POU4F2Q12837 409 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 DYNC1I2Q13409 638 aaKnown RBP11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 TMED1Q13445 227 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 FAM201AQ5SY85 155 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZBTB37Q5TC79 503 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 TEX36Q5VZQ5 186 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 SEMA6DQ8NFY4 1073 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR1M1Q8NGA1 313 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR8B12Q8NGG6 310 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 FAM81AQ8TBF8 368 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 DVL3Q92997 716 aaPredicted RBP11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 DACT3Q96B18 629 aaPredicted RBP11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 C12orf43Q96C57 262 aaKnown RBP11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 TLNRD1Q9H1K6 362 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 CLN6Q9NWW5 311 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 FAM206AQ9NX38 181 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 ERVK-18Q9QC07 812 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 WARS2Q9UGM6 360 aaKnown RBP11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 NUP50Q9UKX7 468 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 RHBDD3Q9Y3P4 386 aa11.13□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZNF816-ZNF321PA0A0X1KG74 233 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 LIPFP07098 398 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 EPHA2P29317 976 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 RBMXP38159 391 aaKnown RBP11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 MAP2K3P46734 347 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 MICBQ29980 383 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 WDR25Q64LD2 544 aaPredicted RBP11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZDHHC23Q8IYP9 409 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 GCSAMQ8N6F7 178 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR8J1Q8NGP2 316 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 RFKQ969G6 155 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 MRPS26Q9BYN8 205 aaKnown RBP11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 ADGRL4Q9HBW9 690 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 VCX3AQ9NNX9 186 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 KAAG1Q9UBP8 84 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 NUFIP1Q9UHK0 495 aaKnown RBP11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 IKZF2Q9UKS7 526 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
SIRPB3P-201ENST00000340424 KIR2DS1A0A191URI9 304 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZNF670-ZNF695F2Z2N8 137 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 ENSAO43768 121 aaKnown RBP11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 MTRF1O75570 445 aaKnown RBP11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 TNFAIP8O95379 198 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 ACKR3P25106 362 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 HTR1FP30939 366 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 CD80P33681 288 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 RPL5P46777 297 aaKnown RBP11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 BPIFB3P59826 476 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 CDC42P60953 191 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 CXCR4P61073 352 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 PRDX4Q13162 271 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 FAM76BQ5HYJ3 339 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZNF322Q6U7Q0 402 aaPredicted RBP11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 WDR82Q6UXN9 313 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 RBMS3Q6XE24 437 aaKnown RBP11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 ZNF841Q6ZN19 808 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 WDR86Q86TI4 376 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 SLC35F2Q8IXU6 374 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR10Z1Q8NGY1 313 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 LRRC29Q8WV35 223 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 TRUB1Q8WWH5 349 aaKnown RBP11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 OR5P3Q8WZ94 311 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 UPRTQ96BW1 309 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 LYZL4Q96KX0 146 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 TECTBQ96PL2 329 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 HIST1H2AAQ96QV6 131 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 IL4I1Q96RQ9 567 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 PKP2Q99959 881 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 PBOV1Q9GZY1 135 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 SEMA6AQ9H2E6 1030 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 RIBC2Q9H4K1 309 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 C8orf4Q9NR00 106 aa11.11□□□□□ -0.63
SIRPB3P-201ENST00000340424 SAC3D1A6NKF1 404 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms