RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 PSMB6P28072 239 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 PNLIPRP2P54317 469 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 HERV-K104P61576 105 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 ZNF273Q14593 569 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 PCK2Q16822 640 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 ELFN2Q5R3F8 820 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 BIVMQ86UB2 503 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 TTC9Q92623 222 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 NMNAT2Q9BZQ4 307 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 WDR13Q9H1Z4 485 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 A0A1W2PR80 420 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 CTDSPLO15194 276 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 LRP3O75074 770 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 OR13C7P0DN81 318 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 MGMTP16455 207 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 AKR1C8PQ5T2L2 129 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 GPR137CQ8N3F9 429 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 SPICQ8N5J4 248 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 ZNF385AQ96PM9 386 aaKnown RBP10.59□□□□□ -0.71
USP1-201ENST00000339950 SLC5A7Q9GZV3 580 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 NPDC1Q9NQX5 325 aaPredicted RBP10.59□□□□□ -0.71
USP1-201ENST00000339950 KIF25Q9UIL4 384 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 LHX6Q9UPM6 363 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 MEMO1Q9Y316 297 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 COL6A6A6NMZ7 2263 aa10.59□□□□□ -0.71
USP1-201ENST00000339950 TRIM77I1YAP6 450 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 CXCL13O43927 109 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 TTRP02766 147 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 IL5P05113 134 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 NFYBP25208 207 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 COL19A1Q14993 1142 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 C11orf87Q6NUJ2 197 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 C5orf24Q7Z6I8 188 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 PLPPR2Q96GM1 343 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 SCARF2Q96GP6 870 aaPredicted RBP10.58□□□□□ -0.71
USP1-201ENST00000339950 ZNF275Q9NSD4 429 aaPredicted RBP10.58□□□□□ -0.71
USP1-201ENST00000339950 ZMAT5Q9UDW3 170 aaKnown RBP10.58□□□□□ -0.71
USP1-201ENST00000339950 PURGQ9UJV8 347 aaKnown RBP10.58□□□□□ -0.71
USP1-201ENST00000339950 FBXO7Q9Y3I1 522 aa10.58□□□□□ -0.71
USP1-201ENST00000339950 FAM166BA8MTA8 275 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 DCAF7P61962 342 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 MEF2DQ14814 521 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 GUCA2BQ16661 112 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 C4orf17Q53FE4 359 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 NHLRC3Q5JS37 347 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 UNQ9370/PRO34162Q6UXP9 181 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 C1QL2Q7Z5L3 287 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 FNDC9Q8TBE3 224 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 MCHR2Q969V1 340 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 CALHM2Q9HA72 323 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 PISDQ9UG56 409 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 C9orf170A2RU37 121 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 ABHD16AO95870 558 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 MICBQ29980 383 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 PLEKHN1Q494U1 663 aaPredicted RBP10.58□□□□□ -0.72
USP1-201ENST00000339950 ADIPOR1Q96A54 375 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 UBE2J1Q9Y385 318 aaPredicted RBP10.58□□□□□ -0.72
USP1-201ENST00000339950 A0A0D9SG52 128 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 RFPL4AA6NLU0 287 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 ZNF814B7Z6K7 855 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 RFPL4AL1F8VTS6 287 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 C1QL1O75973 258 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 S100A12P80511 92 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 TGIF1Q15583 401 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 C21orf62-AS1Q17RA5 79 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 EIF2S3LQ2VIR3 472 aaKnown RBP10.58□□□□□ -0.72
USP1-201ENST00000339950 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 PLCXD3Q63HM9 321 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 FBXW12Q6X9E4 464 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 LYG2Q86SG7 212 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 BVESQ8NE79 360 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 KCNG3Q8TAE7 436 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 GPX8Q8TED1 209 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 SSX3Q99909 188 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 ZCCHC4Q9H5U6 513 aa10.58□□□□□ -0.72
USP1-201ENST00000339950 FREM1Q5H8C1 2179 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 NSG1A0A0A6YYJ2 146 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 GDF1P27539 372 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 FASLGP48023 281 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 CCR5P51681 352 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 CFHR1Q03591 330 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 LTC4SQ16873 150 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 EMC4Q5J8M3 183 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 MYPOPQ86VE0 399 aaPredicted RBP10.57□□□□□ -0.72
USP1-201ENST00000339950 CATSPERDQ86XM0 798 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 SGPP2Q8IWX5 399 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 MCEMP1Q8IX19 187 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 ZNF611Q8N823 705 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 SGK3Q96BR1 496 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 CCDC74BQ96LY2 380 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 PIGQQ9BRB3 760 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 IGLV1-36A0A0B4J1U3 117 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 GLB1P16278 677 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 RAB13P51153 203 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 ZNF84P51523 738 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 EFNA3P52797 238 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 PLGLB1Q02325 96 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms