RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CORTO00230 105 aa11.65□□□□□ -0.55
USP47-202ENST00000339865 CTSAP10619 480 aa11.65□□□□□ -0.55
USP47-202ENST00000339865 TCTN1Q2MV58 587 aa11.65□□□□□ -0.55
USP47-202ENST00000339865 DMRTC1Q5HYR2 192 aa11.65□□□□□ -0.55
USP47-202ENST00000339865 TMEM207Q6UWW9 146 aa11.65□□□□□ -0.55
USP47-202ENST00000339865 MAFAQ8NHW3 353 aaPredicted RBP11.65□□□□□ -0.55
USP47-202ENST00000339865 BICRAQ9NZM4 1560 aa11.65□□□□□ -0.55
USP47-202ENST00000339865 MBD5Q9P267 1494 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 TMEM238LA0A1B0GVL6 79 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 A6NJY4 79 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 ZNF324O75467 553 aaPredicted RBP11.64□□□□□ -0.55
USP47-202ENST00000339865 GPANK1O95872 356 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 SAXO2Q658L1 398 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 TRAT1Q6PIZ9 186 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 NANOGP1Q8N7R0 232 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 TMEM40Q8WWA1 233 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 SCRG1O75711 98 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 FABP2P12104 132 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 DCTDP32321 178 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 ANKRD16Q6P6B7 361 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 TBC1D26Q86UD7 250 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 ISOC2Q96AB3 205 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 ZDHHC5Q9C0B5 715 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 A0A0G2JLL6 359 aaPredicted RBP11.64□□□□□ -0.55
USP47-202ENST00000339865 J3KRW8 73 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 CTSLP07711 333 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 COX6CP09669 75 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 CEBPBP17676 345 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 CD96P40200 585 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 INHBCP55103 352 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 AESQ08117 197 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 PRRT2Q7Z6L0 340 aaPredicted RBP11.64□□□□□ -0.55
USP47-202ENST00000339865 ZNF502Q8TBZ5 544 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 FBXO4Q9UKT5 387 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 LOC107986453A0A1B0GWG9 222 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 SIAH2O43255 324 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 MGPP08493 103 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 FAM157BP0CG42 384 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 TBXA2RP21731 343 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 WNT3P56703 355 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 EMC10Q5UCC4 262 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 ZC3H3Q8IXZ2 948 aaKnown RBP11.64□□□□□ -0.55
USP47-202ENST00000339865 CMTM4Q8IZR5 234 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 LINC00469Q8N7U9 141 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 NPEPL1Q8NDH3 523 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 PARD6GQ9BYG4 376 aaPredicted RBP11.64□□□□□ -0.55
USP47-202ENST00000339865 DUSP21Q9H596 190 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 OR1D5P58170 312 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 TAZQ16635 292 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 MTURNQ8N3F0 131 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 SLC7A10Q9NS82 523 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
USP47-202ENST00000339865 CRYABP02511 175 aaKnown RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 TCL1AP56279 114 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 DCDP81605 110 aaKnown RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 DUSP18Q8NEJ0 188 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OR1N1Q8NGS0 311 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OR52N5Q8NH56 324 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ZNF71Q9NQZ8 489 aaPredicted RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 KIR2DS5A0A0G2JLQ3 304 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 A0A0G2JNG1 304 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 KIR2DS3K7RE56 304 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 HRO43593 1189 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OR10J1P30954 320 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 THBS4P35443 961 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 KIR2DS5Q14953 304 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 SP6Q3SY56 376 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ZNF628Q5EBL2 1059 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 RBM45Q8IUH3 476 aaKnown RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 EXD3Q8N9H8 876 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 HSD17B10Q99714 261 aaKnown RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 FOXQ1Q9C009 403 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 CACFD1Q9UGQ2 172 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 SHANK1Q9Y566 2161 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 SIGLEC6O43699 453 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 EIF1P41567 113 aaKnown RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 GPNMBQ14956 572 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 HLA-BQ31612 363 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 SYT14P1Q58G82 188 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 PRSS36Q5K4E3 855 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 WDR88Q6ZMY6 472 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 MDGA1Q8NFP4 955 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ABHD3Q8WU67 409 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OR2A14Q96R47 310 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 TCFL5Q9UL49 500 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 MMP17Q9ULZ9 603 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 IFITM10A6NMD0 228 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ISLRO14498 428 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 HRASP01112 189 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 HLA-DRB5Q30154 266 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OTUD1Q5VV17 481 aaPredicted RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 WDTC1Q8N5D0 677 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 C1QTNF3Q9BXJ4 246 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 KLK11Q9UBX7 282 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ST3GAL6Q9Y274 331 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms